RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 TAS2R13Q9NYV9 303 aa18.99■□□□□ 0.63
VIM-203ENST00000469543 SLAMF8Q9P0V8 285 aa18.99■□□□□ 0.63
VIM-203ENST00000469543 POLG2Q9UHN1 485 aa18.99■□□□□ 0.63
VIM-203ENST00000469543 FCF1Q9Y324 198 aaKnown RBP18.99■□□□□ 0.63
VIM-203ENST00000469543 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.98■□□□□ 0.63
VIM-203ENST00000469543 C1RP00736 705 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 F11P03951 625 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 ALPIP09923 528 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 SLC26A3P40879 764 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 SUOXP51687 545 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 HK3P52790 923 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CDH4P55283 916 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 ZNF177Q13360 481 aaPredicted RBP18.98■□□□□ 0.63
VIM-203ENST00000469543 HECTD3Q5T447 861 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 FAM117BQ6P1L5 589 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 PHYKPLQ8IUZ5 450 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CRIPAKQ8N1N5 446 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 FBXO39Q8N4B4 442 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 ZNF483Q8TF39 744 aaPredicted RBP18.98■□□□□ 0.63
VIM-203ENST00000469543 SLC29A1Q99808 456 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CD300AQ9UGN4 299 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 AP4S1Q9Y587 144 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CHD5Q8TDI0 1954 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CASP8AP2Q9UKL3 1982 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 C7orf72A4D263 438 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 SPATA31D3P0C874 917 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 UGT1A6P19224 532 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 PLD1Q13393 1074 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 AAK1Q2M2I8 961 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 HABP4Q5JVS0 413 aaKnown RBP18.98■□□□□ 0.63
VIM-203ENST00000469543 CXorf57Q6NSI4 855 aaKnown RBP18.98■□□□□ 0.63
VIM-203ENST00000469543 SPATA31D4Q6ZUB0 917 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 TICAM1Q8IUC6 712 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 WFDC5Q8TCV5 224 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CLSTN3Q9BQT9 956 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 TRMOQ9BU70 441 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 C1orf50Q9BV19 199 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 SLC25A23Q9BV35 468 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 TM6SF2Q9BZW4 377 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CCDC68Q9H2F9 335 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 PAPOLBQ9NRJ5 636 aaKnown RBP18.98■□□□□ 0.63
VIM-203ENST00000469543 CROTQ9UKG9 612 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 PCDHB9Q9Y5E1 797 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 ANKRD36A6QL64 1941 aa18.98■□□□□ 0.63
VIM-203ENST00000469543 CKMT2P17540 419 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 CHN2P52757 468 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 NFKB2Q00653 900 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 CTSL3PQ5NE16 218 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 ALG1LQ6GMV1 187 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 CPNE9Q8IYJ1 553 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 STAG3L4Q8TBR4 150 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 KIAA1191Q96A73 305 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 EME1Q96AY2 570 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 CIB1Q99828 191 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 COQ10BQ9H8M1 238 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 PLK2Q9NYY3 685 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 C2orf81A6NN90 581 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 ZNF839A8K0R7 811 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TIPRLO75663 272 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TSPAN12O95859 305 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 ATP6V1B1P15313 513 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 ITGB6P18564 788 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 GRIA3P42263 894 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 ALDH7A1P49419 539 aaKnown RBP18.97■□□□□ 0.63
VIM-203ENST00000469543 LIN52Q52LA3 116 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 MTX3Q5HYI7 312 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TAS2R42Q7RTR8 314 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 NPAS4Q8IUM7 802 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 CARNMT1Q8N4J0 409 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 CANT1Q8WVQ1 401 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TFB2MQ9H5Q4 396 aaKnown RBP18.97■□□□□ 0.63
VIM-203ENST00000469543 PIF1Q9H611 641 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TMEM181Q9P2C4 612 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 XIRP2A4UGR9 3374 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 FAM149AA5PLN7 773 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 NME4O00746 187 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 CASP2P42575 452 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TAF1AQ15573 450 aaPredicted RBP18.97■□□□□ 0.63
VIM-203ENST00000469543 C5orf22Q49AR2 442 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 KANK2Q63ZY3 851 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 KIAA1841Q6NSI8 718 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 IFNEQ86WN2 208 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 HERC6Q8IVU3 1022 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 OR52B6Q8NGF0 335 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 PIP4K2CQ8TBX8 421 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TLR9Q9NR96 1032 aa18.97■□□□□ 0.63
VIM-203ENST00000469543 TPST1O60507 370 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 KERAO60938 352 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 TMCC1O94876 653 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 FGF4P08620 206 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 ZNF26P17031 533 aaPredicted RBP18.96■□□□□ 0.63
VIM-203ENST00000469543 STX1BP61266 288 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 ADGRF1Q5T601 910 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 ZFP1Q6P2D0 407 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 RAB44Q7Z6P3 723 aaPredicted RBP18.96■□□□□ 0.63
VIM-203ENST00000469543 SYVN1Q86TM6 617 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 FAM126BQ8IXS8 530 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 RHEBL1Q8TAI7 183 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 DNAJB14Q8TBM8 379 aa18.96■□□□□ 0.63
VIM-203ENST00000469543 GRIN3AQ8TCU5 1115 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms