RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMTC1Q8IUR5 882 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 CRELD1Q96HD1 420 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 TEKT5Q96M29 485 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 FCRL3Q96P31 734 aaPredicted RBP18.94■□□□□ 0.62
COL7A1-207ENST00000467985 WDR24Q96S15 920 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 ZNHIT2Q9UHR6 403 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 CNOT6Q9ULM6 557 aaKnown RBP18.94■□□□□ 0.62
COL7A1-207ENST00000467985 ST14Q9Y5Y6 855 aa18.94■□□□□ 0.62
COL7A1-207ENST00000467985 CPNE6O95741 557 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 NDST3O95803 873 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 PTPN3P26045 913 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 TNNT3P45378 269 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-207ENST00000467985 ZFP36L1Q07352 338 aaKnown RBP18.93■□□□□ 0.62
COL7A1-207ENST00000467985 PCSK7Q16549 785 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 PDPK2PQ6A1A2 396 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 KDELC2Q7Z4H8 507 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 DAAM2Q86T65 1068 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 PIM3Q86V86 326 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 CCDC50Q8IVM0 306 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 NAGSQ8N159 534 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 NAF1Q96HR8 494 aaKnown RBP18.93■□□□□ 0.62
COL7A1-207ENST00000467985 UBL7Q96S82 380 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-207ENST00000467985 VAT1Q99536 393 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 ZSCAN5AQ9BUG6 496 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 NFKBIL1Q9UBC1 381 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-207ENST00000467985 SAE1Q9UBE0 346 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-207ENST00000467985 ATXN7L1Q9ULK2 861 aaPredicted RBP18.93■□□□□ 0.62
COL7A1-207ENST00000467985 PCDHGA7Q9Y5G6 932 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 CFAP46Q8IYW2 2715 aa18.93■□□□□ 0.62
COL7A1-207ENST00000467985 hCG_1818297A0A087WSY0 165 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 HACD1B0YJ81 288 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 KLK10O43240 276 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 NDUFA10O95299 355 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 ATP1A1P05023 1023 aaKnown RBP18.92■□□□□ 0.62
COL7A1-207ENST00000467985 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
COL7A1-207ENST00000467985 PECAM1P16284 738 aaPredicted RBP18.92■□□□□ 0.62
COL7A1-207ENST00000467985 ALDH4A1P30038 563 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 UGT1A5P35504 534 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 TMPRSS3P57727 454 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 COPS2P61201 443 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 PPP2R5EQ16537 467 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 MAP9Q49MG5 647 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 SOWAHCQ53LP3 525 aaPredicted RBP18.92■□□□□ 0.62
COL7A1-207ENST00000467985 ZNF569Q5MCW4 686 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 GPR155Q7Z3F1 870 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 SPATA22Q8NHS9 363 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 DPYSL5Q9BPU6 564 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 SPATA16Q9BXB7 569 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 GPR63Q9BZJ6 419 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 GOLPH3Q9H4A6 298 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 AKAP7Q9P0M2 348 aaPredicted RBP18.92■□□□□ 0.62
COL7A1-207ENST00000467985 ZNF711Q9Y462 761 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 PLEKHM1Q9Y4G2 1056 aa18.92■□□□□ 0.62
COL7A1-207ENST00000467985 EPN1Q9Y6I3 576 aaPredicted RBP18.92■□□□□ 0.62
COL7A1-207ENST00000467985 TEX51A0A1B0GUA7 166 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 PMS2P1A4D2B8 440 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 FADS2P1A8MWK0 482 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 GPR89AB7ZAQ6 455 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 B4GAT1O43505 415 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 DNAJC6O75061 913 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 PMPCBO75439 489 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 MT-CYBP00156 380 aaPredicted RBP18.91■□□□□ 0.62
COL7A1-207ENST00000467985 EPOP01588 193 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 JMJD7P0C870 316 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 GPR89BP0CG08 455 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 FECHP22830 423 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 GSDMDP57764 484 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 OR1D5P58170 312 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 WASHC5Q12768 1159 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 B4GALNT4Q76KP1 1039 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 TMC3Q7Z5M5 1100 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 SLITRK4Q8IW52 837 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 EID2BQ96D98 161 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 QKIQ96PU8 341 aaKnown RBP eCLIP18.91■□□□□ 0.62
COL7A1-207ENST00000467985 CMKLR1Q99788 373 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 FERMT1Q9BQL6 677 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 CARD9Q9H257 536 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 FAM153AQ9UHL3 310 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 SHOC2Q9UQ13 582 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 LOXL2Q9Y4K0 774 aa18.91■□□□□ 0.62
COL7A1-207ENST00000467985 OAS3Q9Y6K5 1087 aaKnown RBP18.91■□□□□ 0.62
COL7A1-207ENST00000467985 ZFC3H1O60293 1989 aaKnown RBP18.9■□□□□ 0.62
COL7A1-207ENST00000467985 SLC2A4P14672 509 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 FASLGP48023 281 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 CXADRP78310 365 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 XRCC4Q13426 336 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 SQSTM1Q13501 440 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 AMZ1Q400G9 498 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 PHF19Q5T6S3 580 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 BBS12Q6ZW61 710 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 CHST15Q7LFX5 561 aaPredicted RBP18.9■□□□□ 0.62
COL7A1-207ENST00000467985 ZC3H18Q86VM9 953 aaKnown RBP18.9■□□□□ 0.62
COL7A1-207ENST00000467985 TRAM1L1Q8N609 369 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 GPR26Q8NDV2 337 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 PATE1Q8WXA2 126 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 HTR3CQ8WXA8 447 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 TRABDQ9H4I3 376 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 KLHL8Q9P2G9 620 aaPredicted RBP18.9■□□□□ 0.62
COL7A1-207ENST00000467985 TRHDEQ9UKU6 1024 aa18.9■□□□□ 0.62
COL7A1-207ENST00000467985 EFR3BQ9Y2G0 817 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms