RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-208	ENST00000467080	MRPL44	Q9H9J2	332 aa	Known RBP	5.7	□□□□□ -1.5
RBM17-208	ENST00000467080	HDAC6	Q9UBN7	1215 aa		5.7	□□□□□ -1.5
RBM17-208	ENST00000467080	SWAP70	Q9UH65	585 aa		5.7	□□□□□ -1.5
RBM17-208	ENST00000467080	CD207	Q9UJ71	328 aa		5.7	□□□□□ -1.5
RBM17-208	ENST00000467080	INSL5	Q9Y5Q6	135 aa		5.7	□□□□□ -1.5
RBM17-208	ENST00000467080	EP300	Q09472	2414 aa	Predicted RBP	5.7	□□□□□ -1.5
RBM17-208	ENST00000467080	MYH7B	A7E2Y1	1941 aa		5.7	□□□□□ -1.5
RBM17-208	ENST00000467080	ACACB	O00763	2458 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	MED19	A0JLT2	244 aa	Predicted RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	OR6C68	A6NDL8	312 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	WDR46	O15213	610 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	KCNAB3	O43448	404 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	PRKAB2	O43741	272 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	IDH1	O75874	414 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	AGR2	O95994	175 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	CYP1A2	P05177	515 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	CNP	P09543	421 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	UQCRFS1P1	P0C7P4	283 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	EEF2	P13639	858 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	CHRNB2	P17787	502 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	CDC25A	P30304	524 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	ARRB2	P32121	409 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	MAN1A1	P33908	653 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	PTPN9	P43378	593 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	HTR6	P50406	440 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	PGGT1B	P53609	377 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	SELENOV	P59797	346 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	ANKRD1	Q15327	319 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	TCEAL5	Q5H9L2	206 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	ATF7IP	Q6VMQ6	1270 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	ZDHHC17	Q8IUH5	632 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	FBXO16	Q8IX29	292 aa	Predicted RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	NAXE	Q8NCW5	288 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	SETD9	Q8NE22	299 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	PPHLN1	Q8NEY8	458 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	ZSCAN31	Q96LW9	406 aa	Predicted RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	CTAGE1	Q96RT6	745 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	RAVER2	Q9HCJ3	691 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	KRCC1	Q9NPI7	259 aa	Predicted RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	MAP3K20	Q9NYL2	800 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	NLK	Q9UBE8	527 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	DBNL	Q9UJU6	430 aa	Known RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	FBXO9	Q9UK97	447 aa	Predicted RBP	5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	CHD8	Q9HCK8	2581 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	USP24	Q9UPU5	2620 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	FRYL	O94915	3013 aa		5.69	□□□□□ -1.5
RBM17-208	ENST00000467080	BECN2	A8MW95	431 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	HSPB6	O14558	160 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	SPTLC2	O15270	562 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	ANP32C	O43423	234 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	CSPG5	O95196	566 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	PDGFB	P01127	241 aa	Predicted RBP	5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	IQCF3	P0C7M6	154 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	ARSB	P15848	533 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	CD72	P21854	359 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	BDNF	P23560	247 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	HNF1B	P35680	557 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	AVPR1A	P37288	418 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	CASP2	P42575	452 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	DPP6	P42658	865 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	TRAF1	Q13077	416 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	MAPK7	Q13164	816 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	SLC12A1	Q13621	1099 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	EFR3A	Q14156	821 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	SIM2	Q14190	667 aa	Predicted RBP	5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	GPR18	Q14330	331 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	DUSP6	Q16828	381 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	LCE1A	Q5T7P2	110 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	INTS11	Q5TA45	600 aa	Known RBP	5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	DCAF12L2	Q5VW00	463 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	HEPHL1	Q6MZM0	1159 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	TMEM179	Q6ZVK1	233 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	NME8	Q8N427	588 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	CEP76	Q8TAP6	659 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	OIT3	Q8WWZ8	545 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	TWNK	Q96RR1	684 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	NPL	Q9BXD5	320 aa	Predicted RBP	5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	FTO	Q9C0B1	505 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	ZHX3	Q9H4I2	956 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	KLHL31	Q9H511	634 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	CXorf56	Q9H5V9	222 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	PLAC1	Q9HBJ0	212 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	MCM9	Q9NXL9	1143 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	GRHL1	Q9NZI5	618 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	NCKIPSD	Q9NZQ3	722 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	CFAP47	Q6ZTR5	3102 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	PLXNA4	Q9HCM2	1894 aa		5.68	□□□□□ -1.5
RBM17-208	ENST00000467080	C17orf102	A2RUQ5	167 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	VWA3A	A6NCI4	1184 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	TMEM221	A6NGB7	291 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080		I6L893	689 aa	Predicted RBP	5.67	□□□□□ -1.5
RBM17-208	ENST00000467080		M0R296	226 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	LINC01565	O15544	149 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	KLK10	O43240	276 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	EPB41L2	O43491	1005 aa	Known RBP	5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	HBP1	O60381	514 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	CDKN2A	P42771	156 aa	Known RBP	5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	RFX2	P48378	723 aa		5.67	□□□□□ -1.5
RBM17-208	ENST00000467080	PPP3CC	P48454	512 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms