RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ENTPD7Q9NQZ7 604 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 STK26Q9P289 416 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 SUFUQ9UMX1 484 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 PSAT1Q9Y617 370 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 CASZ1Q86V15 1759 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 TRPM3Q9HCF6 1732 aaPredicted RBP3.56□□□□□ -1.84
XRN1-206ENST00000467077 CRYBG1Q9Y4K1 1723 aa3.56□□□□□ -1.84
XRN1-206ENST00000467077 NRKQ7Z2Y5 1582 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 DISP2A7MBM2 1401 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 TNS3Q68CZ2 1445 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 NINLQ9Y2I6 1382 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 VWA3AA6NCI4 1184 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 IFRD1O00458 451 aaPredicted RBP3.55□□□□□ -1.84
XRN1-206ENST00000467077 PEX12O00623 359 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 RFPL2O75678 378 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 CHRM4P08173 479 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 PAX1P15863 534 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 CHRNB4P30926 498 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 BRWD1-AS2P59051 145 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 C1QTNF8P60827 252 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 XKR6Q5GH73 641 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 FBXO47Q5MNV8 452 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 PDSS1Q5T2R2 415 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 FAAP20Q6NZ36 180 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 MON1AQ86VX9 555 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 SFTPA2Q8IWL1 248 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 ZNF440Q8IYI8 595 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 USP38Q8NB14 1042 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 SPATA22Q8NHS9 363 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 ARRDC2Q8TBH0 407 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 TMEM170AQ8WVE7 144 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 OTULINQ96BN8 352 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 RNF183Q96D59 192 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 TWNKQ96RR1 684 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 OPRPNQ99935 248 aaPredicted RBP3.55□□□□□ -1.84
XRN1-206ENST00000467077 CLSTN3Q9BQT9 956 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRN1-206ENST00000467077 IFT80Q9P2H3 777 aaPredicted RBP3.55□□□□□ -1.84
XRN1-206ENST00000467077 PCDHGB3Q9Y5G1 929 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 RGPD3A6NKT7 1758 aaPredicted RBP3.55□□□□□ -1.84
XRN1-206ENST00000467077 AKAP12Q02952 1782 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 RGPD4Q7Z3J3 1758 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 ALS2Q96Q42 1657 aa3.55□□□□□ -1.84
XRN1-206ENST00000467077 PHRF1Q9P1Y6 1649 aaKnown RBP3.55□□□□□ -1.84
XRN1-206ENST00000467077 PRAG1Q86YV5 1406 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 PARD3Q8TEW0 1356 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 FAM90A7PA6NKC0 464 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 FAM90A22PA8MWA6 464 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 FAM90A12PA8MX19 464 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 FAM90A23PA8MXZ1 464 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 HHLA1C9JL84 531 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 KLK10O43240 276 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 HSPA12AO43301 675 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 TTKP33981 857 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 EFR3AQ14156 821 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 CCNYL2Q5T2Q4 361 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 SFMBT2Q5VUG0 894 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 IL20RBQ6UXL0 311 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 CHD1LQ86WJ1 897 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 SMC5Q8IY18 1101 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 EXOC8Q8IYI6 725 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 AMER3Q8N944 861 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 FGFBP3Q8TAT2 258 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 RAB40AQ8WXH6 277 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 YME1L1Q96TA2 773 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 PYM1Q9BRP8 204 aaKnown RBP3.54□□□□□ -1.84
XRN1-206ENST00000467077 ISCA1Q9BUE6 129 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 MROH8Q9H579 483 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 SPATS2LQ9NUQ6 558 aaKnown RBP3.54□□□□□ -1.84
XRN1-206ENST00000467077 ZHX2Q9Y6X8 837 aa3.54□□□□□ -1.84
XRN1-206ENST00000467077 PARP4Q9UKK3 1724 aaKnown RBP3.53□□□□□ -1.84
XRN1-206ENST00000467077 ARHGEF10O15013 1369 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 ATXN2Q99700 1313 aaKnown RBP3.53□□□□□ -1.84
XRN1-206ENST00000467077 SH2D7A6NKC9 451 aaPredicted RBP3.53□□□□□ -1.84
XRN1-206ENST00000467077 A8MU10 97 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 EBAG9O00559 213 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 TSPAN3O60637 253 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 EIF3JO75822 258 aaKnown RBP3.53□□□□□ -1.84
XRN1-206ENST00000467077 TFPIP10646 304 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 TBL3Q12788 808 aaKnown RBP3.53□□□□□ -1.84
XRN1-206ENST00000467077 SLC12A1Q13621 1099 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 GORABQ5T7V8 394 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 LDHAL6AQ6ZMR3 332 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 PRSS45Q7RTY3 260 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 ODF3L1Q8IXM7 274 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 KLHDC9Q8NEP7 349 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 BBS10Q8TAM1 723 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 GDPD5Q8WTR4 605 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 CNOT9Q92600 299 aaKnown RBP3.53□□□□□ -1.84
XRN1-206ENST00000467077 STAMQ92783 540 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 ZNF653Q96CK0 615 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 REEP2Q9BRK0 252 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 LRRC1Q9BTT6 524 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 EPHX3Q9H6B9 360 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 MYH16Q9H6N6 1097 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 PPCSQ9HAB8 311 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 PLEKHA5Q9HAU0 1116 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 ANKRD10Q9NXR5 420 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 WNK3Q9BYP7 1800 aa3.53□□□□□ -1.84
XRN1-206ENST00000467077 NRXN1Q9ULB1 1477 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms