RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.65■□□□□ 0.74
SDF4-205ENST00000465727 SMG8Q8ND04 991 aaKnown RBP19.65■□□□□ 0.74
SDF4-205ENST00000465727 KLRG1Q96E93 195 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 NSMCE2Q96MF7 247 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 SEPHS2Q99611 448 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 ULBP1Q9BZM6 244 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 MTRRQ9UBK8 725 aa19.65■□□□□ 0.74
SDF4-205ENST00000465727 GRXCR2A6NFK2 248 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 YJEFN3A6XGL0 299 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 UPK1AO00322 258 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 MATN3O15232 486 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 NTRK1P04629 796 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 TTLL4Q14679 1199 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 ZIK1Q3SY52 487 aaPredicted RBP19.64■□□□□ 0.74
SDF4-205ENST00000465727 C6orf141Q5SZD1 244 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 ZNF362Q5T0B9 420 aaPredicted RBP19.64■□□□□ 0.74
SDF4-205ENST00000465727 GPR158Q5T848 1215 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 IQSEC1Q6DN90 963 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 PAQR9Q6ZVX9 377 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 CYP2U1Q7Z449 544 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 FBXO16Q8IX29 292 aaPredicted RBP19.64■□□□□ 0.74
SDF4-205ENST00000465727 TOP6BLQ8N6T0 577 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 SLC22A17Q8WUG5 538 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 TSPAN18Q96SJ8 248 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 FEM1AQ9BSK4 669 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 LRRC3Q9BY71 257 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 TKTL2Q9H0I9 626 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 RMND5AQ9H871 391 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 ANKMY1Q9P2S6 941 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 DSEQ9UL01 958 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 NAALAD2Q9Y3Q0 740 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 SNX5Q9Y5X3 404 aa19.64■□□□□ 0.74
SDF4-205ENST00000465727 SLC22A1O15245 554 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 TBC1D4O60343 1298 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 MGEA5O60502 916 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 PEX10O60683 326 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 PAPSS2O95340 614 aaPredicted RBP19.64■□□□□ 0.73
SDF4-205ENST00000465727 LGALS2P05162 132 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 RAP2AP10114 183 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 HRH2P25021 359 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 HTR1BP28222 390 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 KCNC1P48547 511 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 HNRNPFP52597 415 aaKnown RBP19.64■□□□□ 0.73
SDF4-205ENST00000465727 CDH13P55290 713 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 CTF1Q16619 201 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 PHKG1Q16816 387 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 PYCR3Q53H96 274 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 LDLRAP1Q5SW96 308 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 TMEM214Q6NUQ4 689 aaKnown RBP19.64■□□□□ 0.73
SDF4-205ENST00000465727 BTLAQ7Z6A9 289 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 CILP2Q8IUL8 1156 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 TMEM199Q8N511 208 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 SDCCAG3Q96C92 435 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 FBXO8Q9NRD0 319 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 SLC27A5Q9Y2P5 690 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 PCDHB3Q9Y5E6 796 aa19.64■□□□□ 0.73
SDF4-205ENST00000465727 CLDN5O00501 218 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 KATNA1O75449 491 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 HOXB8P17481 243 aaPredicted RBP19.63■□□□□ 0.73
SDF4-205ENST00000465727 BDNFP23560 247 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 SERPINB10P48595 397 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 EMX2Q04743 252 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 KCTD2Q14681 263 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 NDUFA5Q16718 116 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 PERM1Q5SV97 790 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 KIAA2013Q8IYS2 634 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 PTGR2Q8N8N7 351 aaPredicted RBP19.63■□□□□ 0.73
SDF4-205ENST00000465727 C17orf50Q8WW18 174 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 HPS1Q92902 700 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 TMBIM1Q969X1 311 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 MRGPRX2Q96LB1 330 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 HGH1Q9BTY7 390 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 TUBB1Q9H4B7 451 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 ARNT2Q9HBZ2 717 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 AIG1Q9NVV5 245 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 GIMAP2Q9UG22 337 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 ASPDHA6ND91 283 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 CCDC154A6NI56 674 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 C9JVG2 144 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 DFFAO00273 331 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 SLC7A4O43246 635 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 GABARAPO95166 117 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 CYBBP04839 570 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 PRR35P0CG20 571 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 HOXA11P31270 313 aaPredicted RBP19.63■□□□□ 0.73
SDF4-205ENST00000465727 CYP2C18P33260 490 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 PCYT1AP49585 367 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 FAM98BQ52LJ0 330 aaKnown RBP19.63■□□□□ 0.73
SDF4-205ENST00000465727 TMEM207Q6UWW9 146 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 PLEKHG7Q6ZR37 379 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 SLCO6A1Q86UG4 719 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 ZDHHC13Q8IUH4 622 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 CHDHQ8NE62 594 aaPredicted RBP19.63■□□□□ 0.73
SDF4-205ENST00000465727 ZNF555Q8NEP9 628 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 NLGN2Q8NFZ4 835 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 RHEBL1Q8TAI7 183 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 OTUD5Q96G74 571 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 GJD2Q9UKL4 321 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 PTGDR2Q9Y5Y4 395 aa19.63■□□□□ 0.73
SDF4-205ENST00000465727 ST14Q9Y5Y6 855 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms