RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	THSD1	Q9NS62	852 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TRNAU1AP	Q9NX07	287 aa	Known RBP	5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MIS18A	Q9NYP9	233 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MSRB1	Q9NZV6	116 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SWAP70	Q9UH65	585 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NEUROG3	Q9Y4Z2	214 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	F8	P00451	2351 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KIAA1671	Q9BY89	1806 aa		5.23	□□□□□ -1.57
CACNA1C-223	ENST00000465278		A6NNC1	897 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PER2	O15055	1255 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	IL1A	P01583	271 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	TPM3	P06753	285 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CHRNB1	P11230	501 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ACTN1	P12814	892 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PSMC2	P35998	433 aa	Known RBP	5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GJC1	P36383	396 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CSRP3	P50461	194 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ACLY	P53396	1101 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	COASY	Q13057	564 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MTX1	Q13505	466 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GPR68	Q15743	365 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PIK3CD-AS1	Q5SR53	167 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	INTS11	Q5TA45	600 aa	Known RBP	5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	VWA5B1	Q5TIE3	1220 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CCDC30	Q5VVM6	783 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ISM2	Q6H9L7	571 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	GJB7	Q6PEY0	223 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SHC4	Q6S5L8	630 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	IGFN1	Q86VF2	1251 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	NAXE	Q8NCW5	288 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	DNAAF1	Q8NEP3	725 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	RFWD2	Q8NHY2	731 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	SH3KBP1	Q96B97	665 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ELP4	Q96EB1	424 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	AGAP3	Q96P47	875 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	POLR3C	Q9BUI4	534 aa	Predicted RBP	5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	IFT27	Q9BW83	186 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	KRTAP4-2	Q9BYR5	136 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PORCN	Q9H237	461 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	AGO2	Q9UKV8	859 aa	Known RBP	5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	BTBD3	Q9Y2F9	522 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	PLXNB3	Q9ULL4	1909 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ELP1	O95163	1332 aa		5.22	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MUC22	E2RYF6	1773 aa	Predicted RBP	5.21	□□□□□ -1.57
CACNA1C-223	ENST00000465278	MGA	Q8IWI9	3026 aa		5.21	□□□□□ -1.57
CACNA1C-223	ENST00000465278	CELSR1	Q9NYQ6	3014 aa		5.21	□□□□□ -1.57
CACNA1C-223	ENST00000465278	ANKRD18B	A2A2Z9	1011 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TMEM247	A6NEH6	219 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DDTL	A6NHG4	134 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZNF814	B7Z6K7	855 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	LINC01565	O15544	149 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HBP1	O60381	514 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HMMR	O75330	724 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GUCY1B2	O75343	617 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DDAH2	O95865	285 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	IGHD	P01880	384 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	UROD	P06132	367 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	LCK	P06239	509 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ELAVL4	P26378	380 aa	Known RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SLC16A2	P36021	539 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TMPRSS3	P57727	454 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SSBP2	P81877	361 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GABPB1	Q06547	395 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TEF	Q10587	303 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TBX2	Q13207	712 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	KLF9	Q13886	244 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CCDC142	Q17RM4	750 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZNF528	Q3MIS6	628 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FILIP1L	Q4L180	1135 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SYTL3	Q4VX76	610 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ALG10	Q5BKT4	473 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ALG10B	Q5I7T1	473 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TTC39A	Q5SRH9	613 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	C6orf10	Q5SRN2	563 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	C10orf25	Q5T742	122 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FAM69A	Q5T7M9	428 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MON1A	Q86VX9	555 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	GPSM1	Q86YR5	675 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TBC1D22A	Q8WUA7	517 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TMEM174	Q8WUU8	243 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FAR1	Q8WVX9	515 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FRAT1	Q92837	279 aa	Predicted RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	ZUFSP	Q96AP4	578 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	MSI2	Q96DH6	328 aa	Known RBP	5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PPM1M	Q96MI6	270 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	NEK1	Q96PY6	1258 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SLC29A3	Q9BZD2	475 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	PREB	Q9HCU5	417 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	HEY2	Q9UBP5	337 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	SUN2	Q9UH99	717 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TBX20	Q9UMR3	447 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CYP46A1	Q9Y6A2	500 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	LRRK2	Q5S007	2527 aa		5.21	□□□□□ -1.58
CACNA1C-223	ENST00000465278	APC2	O95996	2303 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	FBN1	P35555	2871 aa	Known RBP	5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	TRBV5-7	A0A0A0MS05	114 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	DNAJC9-AS1	A6NH13	148 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278		J3KRW8	73 aa		5.2	□□□□□ -1.58
CACNA1C-223	ENST00000465278	CEP104	O60308	925 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms