RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 SATB1Q01826 763 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 BTKQ06187 659 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 KPNB1Q14974 876 aaKnown RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 E2F5Q15329 346 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 CARD16Q5EG05 197 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 ZNF697Q5TEC3 545 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 TMEM198Q66K66 360 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 NXNQ6DKJ4 435 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 FAM151BQ6UXP7 276 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 SCUBE1Q8IWY4 988 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 STK40Q8N2I9 435 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 AFAP1L2Q8N4X5 818 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 PAF1Q8N7H5 531 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 ENDOVQ8N8Q3 282 aaKnown RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 GIMAP7Q8NHV1 300 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 STAG3L4Q8TBR4 150 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 GRIN3AQ8TCU5 1115 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 ACTRT2Q8TDY3 377 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 WDR60Q8WVS4 1066 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATF3-207ENST00000464547 CMTM5Q96DZ9 223 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 MAELQ96JY0 434 aaKnown RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 RPL10LQ96L21 214 aaKnown RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 ZSWIM3Q96MP5 696 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 FAM161BQ96MY7 647 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 CATSPER2Q96P56 530 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 LENG8Q96PV6 779 aaPredicted RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 TUBGCP5Q96RT8 1024 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 C19orf43Q9BQ61 176 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 THTPAQ9BU02 230 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 BBS2Q9BXC9 721 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 CEP44Q9C0F1 390 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 RNPEPL1Q9HAU8 725 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 HECAQ9UBI9 543 aaPredicted RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 SLC25A13Q9UJS0 675 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 FIS1Q9Y3D6 152 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 L3MBTL1Q9Y468 752 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 TRAF6Q9Y4K3 522 aa9.77□□□□□ -0.85
ATF3-207ENST00000464547 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 HELZP42694 1942 aaKnown RBP9.77□□□□□ -0.85
ATF3-207ENST00000464547 A0A088AWK7 358 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 C1orf232A0A0U1RR37 186 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 LOC100653049A0A140TA62 436 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CCDC189A1A4V9 331 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 LRRC14BA6NHZ5 514 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 NEDD8-MDP1E9PL57 170 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 GPR39O43194 453 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 KLK8O60259 260 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 SKAP2O75563 359 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 KRT34O76011 436 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 SIX3O95343 332 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 TSPAN12O95859 305 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 RB1P06400 928 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 POU2F2P09086 479 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 TYRP14679 529 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 TCF3P15923 654 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 BPIP17213 487 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 SYN1P17600 705 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CEBPBP17676 345 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CHRM3P20309 590 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 ITGAXP20702 1163 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 RPS3P23396 243 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATF3-207ENST00000464547 ADSLP30566 484 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 CDH13P55290 713 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CUL3Q13618 768 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 DMC1Q14565 340 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 HERC3Q15034 1050 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 TSNQ15631 228 aaKnown RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 CHRNA6Q15825 494 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 PFKFB4Q16877 469 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 KHDC1Q4VXA5 237 aaKnown RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 ACSBG2Q5FVE4 666 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 LY6G5CQ5SRR4 150 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 FAM219BQ5XKK7 198 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 GRAMD4Q6IC98 578 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CRTC1Q6UUV9 634 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CERS6Q6ZMG9 384 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 SNX20Q7Z614 316 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 GRASPQ7Z6J2 395 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 KIAA0907Q7Z7F0 614 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 TSPAN33Q86UF1 283 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 ADIPOR2Q86V24 386 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 SERPINA9Q86WD7 417 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CPNE9Q8IYJ1 553 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 ULK2Q8IYT8 1036 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CBARPQ8N350 705 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 FBXO39Q8N4B4 442 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 PCDH20Q8N6Y1 951 aaKnown RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 CD200R1Q8TD46 325 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 EEF1AKMT1Q8WVE0 214 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 KCNJ9Q92806 393 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 FUBP1Q96AE4 644 aaKnown RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 ZNF707Q96C28 371 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 ECHDC3Q96DC8 303 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CCDC97Q96F63 343 aaPredicted RBP9.76□□□□□ -0.85
ATF3-207ENST00000464547 LINGO1Q96FE5 620 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CLPTM1LQ96KA5 538 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 LYSMD1Q96S90 227 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 RTKNQ9BST9 563 aa9.76□□□□□ -0.85
ATF3-207ENST00000464547 CPEB1Q9BZB8 566 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms