RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MAN2B2Q9Y2E5 1009 aa17.14■□□□□ 0.33
HMGN1-210ENST00000464078 ZNF106Q9H2Y7 1883 aaKnown RBP17.14■□□□□ 0.33
HMGN1-210ENST00000464078 PRRC2CQ9Y520 2896 aaKnown RBP17.13■□□□□ 0.33
HMGN1-210ENST00000464078 A0A0U1RQS6 177 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 LILRA5A6NI73 299 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 A8MU76 341 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 F3P13726 295 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 SEPT6Q14141 434 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 NCAPHQ15003 741 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 SMTNL2Q2TAL5 461 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 SNAP47Q5SQN1 464 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 IYDQ6PHW0 289 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 FAM26EQ8N5C1 309 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 ESX1Q8N693 406 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 TEKT4Q8WW24 435 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 LYSMD1Q96S90 227 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 RIOK2Q9BVS4 552 aaKnown RBP17.13■□□□□ 0.33
HMGN1-210ENST00000464078 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-210ENST00000464078 POLR1EQ9GZS1 481 aaKnown RBP17.13■□□□□ 0.33
HMGN1-210ENST00000464078 HSD3B7Q9H2F3 369 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 RMI1Q9H9A7 625 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 APMAPQ9HDC9 416 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 TBC1D29Q9UFV1 150 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 KCTD3Q9Y597 815 aa17.13■□□□□ 0.33
HMGN1-210ENST00000464078 PCYT1BQ9Y5K3 369 aaPredicted RBP17.13■□□□□ 0.33
HMGN1-210ENST00000464078 CENPEQ02224 2701 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 TRBV23OR9-2A0A075B6M9 112 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 KIR2DS5A0A0G2JLQ3 304 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 A0A0G2JNG1 304 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 PRR19A6NJB7 356 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 KIR2DS3K7RE56 304 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 POLR1CO15160 346 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-210ENST00000464078 FTLP02792 175 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-210ENST00000464078 MYBL1P10243 752 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 TCF4P15884 667 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 TCN2P20062 427 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 CD97P48960 835 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 KLRB1Q12918 225 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 KIR2DS5Q14953 304 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 DEFB109BQ30KR1 87 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 LYSMD3Q7Z3D4 306 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 KDELC2Q7Z4H8 507 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 SLC9B2Q86UD5 537 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 LURAP1LQ8IV03 231 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 PIAS4Q8N2W9 510 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-210ENST00000464078 NCSTNQ92542 709 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 MIB2Q96AX9 1013 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 ZNF653Q96CK0 615 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 TRIM11Q96F44 468 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 SMIM14Q96QK8 99 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 TDRD1Q9BXT4 1180 aaKnown RBP17.12■□□□□ 0.33
HMGN1-210ENST00000464078 MRPL47Q9HD33 250 aaKnown RBP17.12■□□□□ 0.33
HMGN1-210ENST00000464078 NT5MQ9NPB1 228 aa17.12■□□□□ 0.33
HMGN1-210ENST00000464078 RCOR3Q9P2K3 495 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-210ENST00000464078 OAS3Q9Y6K5 1087 aaKnown RBP17.12■□□□□ 0.33
HMGN1-210ENST00000464078 LRRC53A6NM62 1247 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 OR5K4A6NMS3 321 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 INPP4BO15327 924 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 ASMTLO95671 621 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 CES1P23141 567 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 PRKCIP41743 596 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 NOP2P46087 812 aaKnown RBP17.11■□□□□ 0.33
HMGN1-210ENST00000464078 PPM1FP49593 454 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-210ENST00000464078 RPL26P61254 145 aaKnown RBP17.11■□□□□ 0.33
HMGN1-210ENST00000464078 NFATC2Q13469 925 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 HENMT1Q5T8I9 393 aaKnown RBP17.11■□□□□ 0.33
HMGN1-210ENST00000464078 CHST15Q7LFX5 561 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-210ENST00000464078 PLXDC1Q8IUK5 500 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 HSPH1Q92598 858 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 FATE1Q969F0 183 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 PSMG3-AS1Q96PY0 264 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 UCK1Q9HA47 277 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 PCDH18Q9HCL0 1135 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 AMACRQ9UHK6 382 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 ZNHIT2Q9UHR6 403 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 CNOT6Q9ULM6 557 aaKnown RBP17.11■□□□□ 0.33
HMGN1-210ENST00000464078 RPL26L1Q9UNX3 145 aaKnown RBP17.11■□□□□ 0.33
HMGN1-210ENST00000464078 KCNMB2Q9Y691 235 aa17.11■□□□□ 0.33
HMGN1-210ENST00000464078 ICE1Q9Y2F5 2266 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 TOX3O15405 576 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-210ENST00000464078 PRLP01236 227 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 C9P02748 559 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 ATP1A1P05023 1023 aaKnown RBP17.1■□□□□ 0.33
HMGN1-210ENST00000464078 RARAP10276 462 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 CLCNKAP51800 687 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 EPHB1P54762 984 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 IHHQ14623 411 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 TCTN3Q6NUS6 607 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 ZNF571Q7Z3V5 609 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-210ENST00000464078 NIPA2Q8N8Q9 360 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 MAML1Q92585 1016 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 WDR24Q96S15 920 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 HAUS4Q9H6D7 363 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 ANO10Q9NW15 660 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 AIPL1Q9NZN9 384 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 CPNE7Q9UBL6 633 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 KCNK6Q9Y257 313 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 PLAAQ9Y263 795 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 PRKAB1Q9Y478 270 aa17.1■□□□□ 0.33
HMGN1-210ENST00000464078 RPS6KL1Q9Y6S9 549 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms