RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PATE1Q8WXA2 126 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 NAT6Q93015 286 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 TAAR2Q9P1P5 351 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 GPSM3Q9Y4H4 160 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 ACACAQ13085 2346 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 CSO75390 466 aaKnown RBP12.87□□□□□ -0.35
XRN1-203ENST00000463916 ASMTLO95671 621 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 PYGLP06737 847 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 CETN2P41208 172 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 CCZ1BP86790 482 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 CCZ1P86791 482 aaPredicted RBP12.87□□□□□ -0.35
XRN1-203ENST00000463916 MPP3Q13368 585 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 HLTFQ14527 1009 aaKnown RBP eCLIP12.87□□□□□ -0.35
XRN1-203ENST00000463916 CDKL3Q8IVW4 592 aaPredicted RBP12.87□□□□□ -0.35
XRN1-203ENST00000463916 TTC30BQ8N4P2 665 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 SPATA16Q9BXB7 569 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 DKK4Q9UBT3 224 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 TMPRSS11EQ9UL52 423 aa12.87□□□□□ -0.35
XRN1-203ENST00000463916 A0A1W2PNU3 283 aaPredicted RBP12.86□□□□□ -0.35
XRN1-203ENST00000463916 A0A1W2PQM1 296 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 BUD23O43709 281 aaKnown RBP12.86□□□□□ -0.35
XRN1-203ENST00000463916 PSMB4P28070 264 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 PDX1P52945 283 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 MAZP56270 477 aaKnown RBP12.86□□□□□ -0.35
XRN1-203ENST00000463916 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
XRN1-203ENST00000463916 RTP5Q14D33 572 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 ISXQ2M1V0 245 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 CERCAMQ5T4B2 595 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 C17orf82Q86X59 251 aaPredicted RBP12.86□□□□□ -0.35
XRN1-203ENST00000463916 OR2M4Q96R27 311 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 APOL2Q9BQE5 337 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 GSDMCQ9BYG8 508 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 NRSN2Q9GZP1 204 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 ATXN10Q9UBB4 475 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 RAXQ9Y2V3 346 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 SCN8AQ9UQD0 1980 aa12.86□□□□□ -0.35
XRN1-203ENST00000463916 NTN3O00634 580 aaPredicted RBP12.85□□□□□ -0.35
XRN1-203ENST00000463916 KRT86O43790 486 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ECEL1O95672 775 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 EML2O95834 649 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ADRA1AP35348 466 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 HMGCLP35914 325 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 DCDC1P59894 354 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 CCL7P80098 99 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 PTPRCAPQ14761 206 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 C14orf28Q4W4Y0 310 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 RANBP10Q6VN20 620 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 NAGSQ8N159 534 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 FAM71DQ8N9W8 422 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 BLOC1S5Q8TDH9 187 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ZDHHC1Q8WTX9 485 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 SPATA13Q96N96 652 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 FICDQ9BVA6 458 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 LZTFL1Q9NQ48 299 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 LRIT1Q9P2V4 623 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 NFKBIL1Q9UBC1 381 aaPredicted RBP12.85□□□□□ -0.35
XRN1-203ENST00000463916 AK5Q9Y6K8 562 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 PMS2P1A4D2B8 440 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 GPR39O43194 453 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 USP12O75317 370 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 SLC25A14O95258 325 aaPredicted RBP12.85□□□□□ -0.35
XRN1-203ENST00000463916 MPOP05164 745 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 GLB1P16278 677 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 CA5AP35218 305 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ACTR1BP42025 376 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 GDF10P55107 478 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ACTR1AP61163 376 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
XRN1-203ENST00000463916 GALNT13Q8IUC8 556 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 TRAM1L1Q8N609 369 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
XRN1-203ENST00000463916 SLC35B2Q8TB61 432 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ATG4AQ8WYN0 398 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 NXPE2Q96DL1 559 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ATXN7L3BQ96GX2 97 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 DEPDC7Q96QD5 511 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ZSCAN5AQ9BUG6 496 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 FSD1LQ9BXM9 530 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 CDH19Q9H159 772 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 IL26Q9NPH9 171 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 IL17CQ9P0M4 197 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 VPS18Q9P253 973 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 APPL1Q9UKG1 709 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 ENTPD2Q9Y5L3 495 aa12.85□□□□□ -0.35
XRN1-203ENST00000463916 BRINP1O60477 761 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 MTX2O75431 263 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 PTMAP06454 111 aaKnown RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 ZNF8P17098 575 aaPredicted RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 HLA-DPA1P20036 260 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 GEMP55040 296 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 MSLNQ13421 630 aaPredicted RBP12.84□□□□□ -0.35
XRN1-203ENST00000463916 SPARCL1Q14515 664 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ATP13A5Q4VNC0 1218 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 MEI1Q5TIA1 1274 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 ITPRIPL1Q6GPH6 555 aa12.84□□□□□ -0.35
XRN1-203ENST00000463916 RBM44Q6ZP01 1051 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms