RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TGIF1Q15583 401 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 CLPPQ16740 277 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-205ENST00000463818 NKAIN2Q5VXU1 208 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 NT5DC3Q86UY8 548 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 RHOT1Q8IXI2 618 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 USP7Q93009 1102 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 IMP4Q96G21 291 aaKnown RBP18.71■□□□□ 0.59
SF3A1-205ENST00000463818 WBP1Q96G27 269 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 AGAP3Q96P47 875 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 CCNL2Q96S94 520 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-205ENST00000463818 DDX56Q9NY93 547 aaKnown RBP18.71■□□□□ 0.59
SF3A1-205ENST00000463818 ACSL6Q9UKU0 697 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 INTUQ9ULD6 942 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 PRKAB1Q9Y478 270 aa18.71■□□□□ 0.59
SF3A1-205ENST00000463818 PCYT1BQ9Y5K3 369 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-205ENST00000463818 FADS2P1A8MWK0 482 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 COMTP21964 271 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 DYNLT1P63172 113 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 LRP8Q14114 963 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 TCEAL1Q15170 157 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 HENMT1Q5T8I9 393 aaKnown RBP18.7■□□□□ 0.58
SF3A1-205ENST00000463818 MFSD7Q6UXD7 560 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 LYSMD3Q7Z3D4 306 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 CNGA4Q8IV77 575 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 EID2BQ96D98 161 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 OLFM3Q96PB7 478 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 TRIB3Q96RU7 358 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 BRD8Q9H0E9 1235 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 SLC25A51Q9H1U9 297 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 ZFYVE1Q9HBF4 777 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 AKAP7Q9P0M2 348 aaPredicted RBP18.7■□□□□ 0.58
SF3A1-205ENST00000463818 VPS18Q9P253 973 aa18.7■□□□□ 0.58
SF3A1-205ENST00000463818 IGHV1OR21-1A0A087WYE8 117 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 PRAMEF33A0A0G2JMD5 474 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 IGHV5-10-1A0A0J9YXX1 117 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 PPP1R12AO14974 1030 aaPredicted RBP18.69■□□□□ 0.58
SF3A1-205ENST00000463818 PRAMEF10O60809 474 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 EML2O95834 649 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 CCL4P13236 92 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 LIMK2P53671 638 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 CFHR1Q03591 330 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 TBX2Q13207 712 aaPredicted RBP18.69■□□□□ 0.58
SF3A1-205ENST00000463818 SQSTM1Q13501 440 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 CHST15Q7LFX5 561 aaPredicted RBP18.69■□□□□ 0.58
SF3A1-205ENST00000463818 ZFAND4Q86XD8 727 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 RCBTB1Q8NDN9 531 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 TTC9Q92623 222 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 GLOD4Q9HC38 313 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 KCNK4Q9NYG8 393 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 SHOC2Q9UQ13 582 aa18.69■□□□□ 0.58
SF3A1-205ENST00000463818 MGAQ8IWI9 3026 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 C9orf172C9J069 976 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 SPOPO43791 374 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 PIRTP0C851 137 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 MPSTP25325 297 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 CDK18Q07002 472 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 PCSK7Q16549 785 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 TEX44Q53QW1 395 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 KIAA1614Q5VZ46 1190 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 TMC3Q7Z5M5 1100 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 ZNF843Q8N446 348 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 SFRP1Q8N474 314 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 SPATA22Q8NHS9 363 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 SLC37A2Q8TED4 501 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 TADA1Q96BN2 335 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 CCDC74BQ96LY2 380 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 RMI1Q9H9A7 625 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 MAGEE1Q9HCI5 957 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 FOXJ2Q9P0K8 574 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 TBC1D29Q9UFV1 150 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 ALG6Q9Y672 507 aa18.68■□□□□ 0.58
SF3A1-205ENST00000463818 AHCTF1Q8WYP5 2266 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 HGSO14964 777 aaPredicted RBP18.67■□□□□ 0.58
SF3A1-205ENST00000463818 NUAK1O60285 661 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 LIPCP11150 499 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 CDKN2BP42772 138 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 MAGEA1P43355 309 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 NOP2P46087 812 aaKnown RBP18.67■□□□□ 0.58
SF3A1-205ENST00000463818 FASLGP48023 281 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 TRA2AQ13595 282 aaKnown RBP eCLIP18.67■□□□□ 0.58
SF3A1-205ENST00000463818 LLGL1Q15334 1064 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 TMEM164Q5U3C3 297 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 IYDQ6PHW0 289 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 BZW1Q7L1Q6 419 aaKnown RBP18.67■□□□□ 0.58
SF3A1-205ENST00000463818 ZNF761Q86XN6 746 aaPredicted RBP18.67■□□□□ 0.58
SF3A1-205ENST00000463818 GPR26Q8NDV2 337 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 OR4D9Q8NGE8 314 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 SLC38A3Q99624 504 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 SPATA16Q9BXB7 569 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 GPR63Q9BZJ6 419 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 ARFGAP3Q9NP61 516 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 ATXN10Q9UBB4 475 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 SAE1Q9UBE0 346 aaPredicted RBP18.67■□□□□ 0.58
SF3A1-205ENST00000463818 KCNK6Q9Y257 313 aa18.67■□□□□ 0.58
SF3A1-205ENST00000463818 GRID2O43424 1007 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 CST8O60676 142 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 SNX2O60749 519 aa18.66■□□□□ 0.58
SF3A1-205ENST00000463818 SLC25A14O95258 325 aaPredicted RBP18.66■□□□□ 0.58
SF3A1-205ENST00000463818 MT-CYBP00156 380 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms