RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 MARK1Q9P0L2 795 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 CTTNBP2NLQ9P2B4 639 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 ATXN10Q9UBB4 475 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 IP6K2Q9UHH9 426 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC12A6Q9UHW9 1150 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 NENFQ9UMX5 172 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC27A6Q9Y2P4 619 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 PCDHA13Q9Y5I0 950 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 ENTPD2Q9Y5L3 495 aa6.04□□□□□ -1.44
SMARCC1-204ENST00000462198 APCP25054 2843 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 MTORP42345 2549 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 GOLGA6L10A0A0M3HER8 536 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CCDC162PA2VCL2 907 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 TMEM191CA6NGB0 347 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 MYO1FO00160 1098 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 MTSS1O43312 755 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 KDM1AO60341 852 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 MTRF1O75570 445 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 ZNF189O75820 626 aaPredicted RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 DNAJC8O75937 253 aaPredicted RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 LCA5LO95447 670 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 DNTTP04053 509 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CYBBP04839 570 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CYP1A2P05177 515 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 GP1BAP07359 652 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 TMEM253P0C7T8 217 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 TGM2P21980 687 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC5A2P31639 672 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CHKAP35790 457 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CD97P48960 835 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CXCR3P49682 368 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 RPS14P62263 151 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 KRT83P78385 493 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 PHEXP78562 749 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 OGDHQ02218 1023 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 PCDH1Q08174 1060 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 RIPK1Q13546 671 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SNX1Q13596 522 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 BLMHQ13867 455 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 PIGHQ14442 188 aaPredicted RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 MYBPC3Q14896 1274 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CNGA3Q16281 694 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 INAQ16352 499 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 C15orf59Q2T9L4 293 aaPredicted RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC45A4Q5BKX6 768 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CMPK2Q5EBM0 449 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 ADGRF1Q5T601 910 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SCYL2Q6P3W7 929 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 C6orf89Q6UWU4 347 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SERPINA13PQ6UXR4 307 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 ADAMTSL4Q6UY14 1074 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 STRADAQ7RTN6 431 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 VN1R5Q7Z5H4 357 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 C14orf80Q86SX3 495 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 ATP6V0D2Q8N8Y2 350 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 WDR36Q8NI36 951 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 MAPK15Q8TD08 544 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 GANCQ8TET4 914 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 FAM172AQ8WUF8 416 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 PMM1Q92871 262 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 NT5C3BQ969T7 300 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 AZIN2Q96A70 460 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 TBC1D31Q96DN5 1066 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 ARHGEF26Q96DR7 871 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 PGAP3Q96FM1 320 aaPredicted RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SLC39A13Q96H72 371 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 BTN2A3PQ96KV6 586 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 TRAPPC9Q96Q05 1148 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 CNPY3Q9BT09 278 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SPATA9Q9BWV2 254 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 TKTL2Q9H0I9 626 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 VCX3BQ9H321 246 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 PCDH18Q9HCL0 1135 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 VCX3AQ9NNX9 186 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 PIGVQ9NUD9 493 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 UVRAGQ9P2Y5 699 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 ANAPC7Q9UJX3 599 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 AGO1Q9UL18 857 aaKnown RBP6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 INTUQ9ULD6 942 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SOX13Q9UN79 622 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 NCKAP1Q9Y2A7 1128 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 SAR1BQ9Y6B6 198 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 NIPBLQ6KC79 2804 aaeCLIP6.03□□□□□ -1.441e-23■■□□□ 11.7
SMARCC1-204ENST00000462198 CELSR1Q9NYQ6 3014 aa6.03□□□□□ -1.44
SMARCC1-204ENST00000462198 NYNRINQ9P2P1 1898 aaKnown RBP6.02□□□□□ -1.44
SMARCC1-204ENST00000462198 CHD5Q8TDI0 1954 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 SPENQ96T58 3664 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 PRRC2CQ9Y520 2896 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ADGRG4Q8IZF6 3080 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 TYW5A2RUC4 315 aaKnown RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 LRRD1A4D1F6 860 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 TMEM110-MUSTN1A8MSY1 372 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 KCNU1A8MYU2 1149 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ALG1L2C9J202 215 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 F5H5T6 163 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ACSL4O60488 711 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 ENDOD1O94919 500 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 LATS1O95835 1130 aa6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 MYCLP1P12525 358 aaPredicted RBP6.02□□□□□ -1.45
SMARCC1-204ENST00000462198 DGKAP23743 735 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms