RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	EPHA4	P54764	986 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	LRRC66	Q68CR7	880 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	IYD	Q6PHW0	289 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	USP45	Q70EL2	814 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	PLXDC1	Q8IUK5	500 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	SPOCK2	Q92563	424 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	SCRN2	Q96FV2	425 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	NUDCD1	Q96RS6	583 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	PEBP4	Q96S96	227 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	SNRNP25	Q9BV90	132 aa	Known RBP	13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	LUZP4	Q9P127	313 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	MAP10	Q9P2G4	905 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	KCND3	Q9UK17	655 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	SHANK1	Q9Y566	2161 aa		13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578	MN1	Q10571	1320 aa	Predicted RBP	13.62	□□□□□ -0.23
PABPC4-208	ENST00000461578		A6NCN8	305 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	DNAJC6	O75061	913 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	PGLS	O95336	258 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	TYRP1	P17643	537 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	DCT	P40126	519 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	JAM2	P57087	298 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	CHAF1B	Q13112	559 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	MRPL49	Q13405	166 aa	Known RBP	13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	SEMA5A	Q13591	1074 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	DNASE1L3	Q13609	305 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	SYCP1	Q15431	976 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	PRR30	Q53SZ7	412 aa	Predicted RBP	13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	PPP1R15B	Q5SWA1	713 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	ERMARD	Q5T6L9	678 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	ARMC12	Q5T9G4	340 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	CPZ	Q66K79	652 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	C9orf72	Q96LT7	481 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	TGM7	Q96PF1	710 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	RIOK2	Q9BVS4	552 aa	Known RBP	13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	SAMSN1	Q9NSI8	373 aa	Known RBP	13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	CPNE7	Q9UBL6	633 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	MAP4K5	Q9Y4K4	846 aa		13.61	□□□□□ -0.23
PABPC4-208	ENST00000461578	RASSF9	O75901	435 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	PDHA1	P08559	390 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	ANKRD34C	P0C6C1	535 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	CCNYL3	P0C7X3	344 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	PSMA2	P25787	234 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	PGD	P52209	483 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	PTS	Q03393	145 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	DPCR1	Q3MIW9	517 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	EXD1	Q8NHP7	514 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	PRR7	Q8TB68	274 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	CT55	Q8WUE5	264 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	PIH1D2	Q8WWB5	315 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	COX14	Q96I36	57 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	ZNF599	Q96NL3	588 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	RUFY1	Q96T51	708 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	MGME1	Q9BQP7	344 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	HERPUD2	Q9BSE4	406 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	SLC25A23	Q9BV35	468 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	OGFR	Q9NZT2	677 aa		13.6	□□□□□ -0.23
PABPC4-208	ENST00000461578	KIR2DS5	A0A0G2JLQ3	304 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578		A0A0G2JNG1	304 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	TCP11X1	B4DZS4	312 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	KIR2DS3	K7RE56	304 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	SPAG6	O75602	509 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	CLDN1	O95832	211 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	PEX11B	O96011	259 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	C9	P02748	559 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	F3	P13726	295 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	SLC2A4	P14672	509 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	AMD1	P17707	334 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	HSPA9	P38646	679 aa	Known RBP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	GARS	P41250	739 aa	Known RBP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	LEPR	P48357	1165 aa	Known RBP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	CCL11	P51671	97 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	RPS18	P62269	152 aa	Known RBP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	KIR2DS5	Q14953	304 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	TCP11X2	Q5H9J9	407 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	LYSMD3	Q7Z3D4	306 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	APLF	Q8IW19	511 aa	Predicted RBP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	BBS5	Q8N3I7	341 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	ARFGAP1	Q8N6T3	406 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	OSGEPL1	Q9H4B0	414 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	EPB41L1	Q9H4G0	881 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	ACTL8	Q9H568	366 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	CWC15	Q9P013	229 aa	Known RBP	13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	PADI1	Q9ULC6	663 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	SRPK3	Q9UPE1	567 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	PCDHGA6	Q9Y5G7	932 aa		13.59	□□□□□ -0.23
PABPC4-208	ENST00000461578	MED13	Q9UHV7	2174 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	LILRA5	A6NI73	299 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	ARGFX	A6NJG6	315 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	EIF3CL	B5ME19	914 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	ATMIN	O43313	823 aa	Predicted RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	KIF1C	O43896	1103 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	SORBS2	O94875	1100 aa	Known RBP	13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	UBXN7	O94888	489 aa		13.58	□□□□□ -0.24
PABPC4-208	ENST00000461578	TIAF1	O95411	115 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms