RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ERI2A8K979 691 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TNFRSF10CO14798 259 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 BRINP1O60477 761 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 USP12O75317 370 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PIRTP0C851 137 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 EIF2S3P41091 472 aaKnown RBP13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LMAN1P49257 510 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GDF10P55107 478 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 KIAA1024LP59773 190 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SIX1Q15475 284 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ALG11Q2TAA5 492 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ZDHHC20Q5W0Z9 365 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GUSBP11Q6P575 273 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RANBP10Q6VN20 620 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LYSMD3Q7Z3D4 306 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TMC3Q7Z5M5 1100 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LINC00523Q86TU6 105 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PDZD3Q86UT5 571 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PLA2G15Q8NCC3 412 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 OR56A4Q8NGH8 313 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ZNF578Q96N58 590 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 NAPGQ99747 312 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TBL1YQ9BQ87 522 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TCEAL2Q9H3H9 227 aaPredicted RBP13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LRRC40Q9H9A6 602 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PAK5Q9P286 719 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CD84Q9UIB8 345 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GPR34Q9UPC5 381 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SHOC2Q9UQ13 582 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ZNF711Q9Y462 761 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 DGKBQ9Y6T7 804 aa13.17□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ADAMTS20P59510 1910 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 MYLKQ15746 1914 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LY6G6EA0A0G2JKS1 128 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 A0A0U1RQS6 177 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 EIF4E1BA6NMX2 242 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 C2orf81A6NN90 581 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 E7EVH7 732 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TMX2-CTNND1H3BSU7 103 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 METTL18O95568 372 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GAS8O95995 478 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RBMS1P29558 406 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ADRA1AP35348 466 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 LSSP48449 732 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GABREP78334 506 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PDE1BQ01064 536 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PEX6Q13608 980 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SPIDRQ14159 915 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TBC1D25Q3MII6 688 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SLC35F3Q8IY50 421 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 BRSK1Q8TDC3 778 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 BLOC1S5Q8TDH9 187 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 MAGOHBQ96A72 148 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 MS4A14Q96JA4 679 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TEX101Q9BY14 249 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CLPBQ9H078 707 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SYNDIG1Q9H7V2 258 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 POLR1BQ9H9Y6 1135 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ARNT2Q9HBZ2 717 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SIRPGQ9P1W8 387 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 MOSPD1Q9UJG1 213 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 U3KQA8 63 aa13.16□□□□□ -0.3
RAB11FIP3-207ENST00000461009 URB1O60287 2271 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 DMXL2Q8TDJ6 3036 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ZW10O43264 779 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PPFIA2O75334 1257 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CRTAMO95727 393 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 AP2A1O95782 977 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 MYCLP1P12525 358 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HMGCLP35914 325 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CHRNA4P43681 627 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PCBP4P57723 403 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 DCDC1P59894 354 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ERVPABLB-1P60509 514 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 TAF1AQ15573 450 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ISXQ2M1V0 245 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 BROXQ5VW32 411 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 KCTD11Q693B1 232 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ADAMTSL4Q6UY14 1074 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RFLNAQ6ZTI6 216 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GLT6D1Q7Z4J2 308 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HEATR4Q86WZ0 1026 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 KLHDC8BQ8IXV7 354 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 PRELID2Q8N945 189 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 ZNF248Q8NDW4 579 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 COG1Q8WTW3 980 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 FUBP1Q96AE4 644 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 HIC2Q96JB3 615 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CCDC3Q9BQI4 270 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 GORASP1Q9BQQ3 440 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 RIOK2Q9BVS4 552 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 SPATA16Q9BXB7 569 aa13.15□□□□□ -0.3
RAB11FIP3-207ENST00000461009 CAAP1Q9H8G2 361 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms