RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 HARBI1Q96MB7 349 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 NUDCD1Q96RS6 583 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 SLC25A23Q9BV35 468 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 RTN4RQ9BZR6 473 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PNRC2Q9NPJ4 139 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 GPR108Q9NPR9 543 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PAPOLBQ9NRJ5 636 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 MTMR10Q9NXD2 777 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 CISD1Q9NZ45 108 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 FBXW11Q9UKB1 542 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 SYNJ1O43426 1573 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 EDDM13A0A1B0GTR0 161 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 C2CD4BA6NLJ0 364 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 MAGEB17A8MXT2 336 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 IPO8O15397 1037 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 PRPF4O43172 522 aaKnown RBP eCLIP2.98□□□□□ -1.93
HPS3-203ENST00000460822 RSL1D1O76021 490 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 CLDN7O95471 211 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 DNASE1P24855 282 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PRKCIP41743 596 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PRCPP42785 496 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 FAM27E3Q08E93 113 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 KRT33BQ14525 404 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PNLIPRP3Q17RR3 467 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 TTC31Q49AM3 519 aaPredicted RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 TMEM119Q4V9L6 283 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 TTC39AQ5SRH9 613 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 ARMC4Q5T2S8 1044 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 TMEM211Q6ICI0 200 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PQLC2Q6ZP29 291 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 CATSPER4Q7RTX7 472 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 LMNTD2Q8IXW0 634 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 CCAR2Q8N163 923 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 GRK7Q8WTQ7 553 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 KCNE4Q8WWG9 221 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 MAP4K1Q92918 833 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PTP4A1Q93096 173 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 VCPIP1Q96JH7 1222 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 EGLN2Q96KS0 407 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 ZNF830Q96NB3 372 aaPredicted RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 ACOX2Q99424 681 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 PI4K2AQ9BTU6 479 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 GPR88Q9GZN0 384 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 NPFFR1Q9GZQ6 430 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 SLCO5A1Q9H2Y9 848 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 MMP27Q9H306 513 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 MBNL1Q9NR56 388 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 OLAHQ9NV23 265 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 ANKRD10Q9NXR5 420 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 COPG2Q9UBF2 871 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 RNF7Q9UBF6 113 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 DNAJB4Q9UDY4 337 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 ODF2LQ9ULJ1 636 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 TMCC3Q9ULS5 477 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 WBP11Q9Y2W2 641 aaKnown RBP2.98□□□□□ -1.93
HPS3-203ENST00000460822 FANCIQ9NVI1 1328 aa2.98□□□□□ -1.93
HPS3-203ENST00000460822 DNAJC9-AS1A6NH13 148 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 CGB1A6NKQ9 187 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 OR6C76A6NM76 312 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 KRTAP29-1A8MX34 341 aaPredicted RBP2.97□□□□□ -1.93
HPS3-203ENST00000460822 SYNCRIPO60506 623 aaKnown RBP2.97□□□□□ -1.93
HPS3-203ENST00000460822 DAB1O75553 588 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 TRUB2O95900 331 aaKnown RBP2.97□□□□□ -1.93
HPS3-203ENST00000460822 MMP2P08253 660 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 SUPT20HL2P0C7V6 817 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 FAM200BP0CF97 657 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 CBSLP0DN79 551 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 HOXC8P31273 242 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 TNFSF8P32971 234 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 CBSP35520 551 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 AMPHP49418 695 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 RAB28P51157 221 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 YWHAHQ04917 246 aaPredicted RBP2.97□□□□□ -1.93
HPS3-203ENST00000460822 SUPT20HL1Q3ZLR7 823 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 TEX38Q6PEX7 206 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 CNSTQ6PJW8 725 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 PPP1R21Q6ZMI0 780 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 ZDHHC23Q8IYP9 409 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 FBXO39Q8N4B4 442 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 IQUBQ8NA54 791 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 ZNF398Q8TD17 642 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 TRPC4APQ8TEL6 797 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 DDB2Q92466 427 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 MR1Q95460 341 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 ERGIC1Q969X5 290 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 MSI2Q96DH6 328 aaKnown RBP2.97□□□□□ -1.93
HPS3-203ENST00000460822 CABS1Q96KC9 395 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 NUP85Q9BW27 656 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 ACAT2Q9BWD1 397 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 SPATC1LQ9H0A9 340 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 SPAG4Q9NPE6 437 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 CYSLTR2Q9NS75 346 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 RNF146Q9NTX7 359 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 DDX43Q9NXZ2 648 aaKnown RBP2.97□□□□□ -1.93
HPS3-203ENST00000460822 HACL1Q9UJ83 578 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 NFE2L3Q9Y4A8 694 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 LIPGQ9Y5X9 500 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 STON1Q9Y6Q2 735 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 MAPKBP1O60336 1514 aa2.97□□□□□ -1.93
HPS3-203ENST00000460822 UNC13AQ9UPW8 1703 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms