RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 OLFM3Q96PB7 478 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 WDR24Q96S15 920 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 ANP32EQ9BTT0 268 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 FAM83DQ9H4H8 585 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 RMI1Q9H9A7 625 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 SPTLC3Q9NUV7 552 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 FOXJ2Q9P0K8 574 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 SEPT10Q9P0V9 454 aa22.6■■□□□ 1.21
PTPN4-207ENST00000460162 IGHV1OR21-1A0A087WYE8 117 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 IGHV5-10-1A0A0J9YXX1 117 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 KRT1P04264 644 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 ZFXP17010 805 aaPredicted RBP22.59■■□□□ 1.21
PTPN4-207ENST00000460162 LIMK2P53671 638 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 SQSTM1Q13501 440 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 TGIF1Q15583 401 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 TMEM164Q5U3C3 297 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 KIAA1614Q5VZ46 1190 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 ZNF574Q6ZN55 896 aaPredicted RBP22.59■■□□□ 1.21
PTPN4-207ENST00000460162 USP53Q70EK8 1073 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 SFRP1Q8N474 314 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 SLC37A2Q8TED4 501 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 USP7Q93009 1102 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 CHP1Q99653 195 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 NHEJ1Q9H9Q4 299 aaPredicted RBP22.59■■□□□ 1.21
PTPN4-207ENST00000460162 WDR70Q9NW82 654 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 KCNK4Q9NYG8 393 aa22.59■■□□□ 1.21
PTPN4-207ENST00000460162 CNOT6Q9ULM6 557 aaKnown RBP22.59■■□□□ 1.21
PTPN4-207ENST00000460162 OAS3Q9Y6K5 1087 aaKnown RBP22.59■■□□□ 1.21
PTPN4-207ENST00000460162 FADS2P1A8MWK0 482 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 C9orf172C9J069 976 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.58■■□□□ 1.21
PTPN4-207ENST00000460162 AGRPO00253 132 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 ATP1A1P05023 1023 aaKnown RBP22.58■■□□□ 1.21
PTPN4-207ENST00000460162 THRAP10827 490 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 CSF2RBP32927 897 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 AP1B1Q10567 949 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 GALNT3Q14435 633 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 SLC14A2Q15849 920 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 RCBTB1Q8NDN9 531 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 IMP4Q96G21 291 aaKnown RBP22.58■■□□□ 1.21
PTPN4-207ENST00000460162 TRIB3Q96RU7 358 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 MAK16Q9BXY0 300 aaKnown RBP22.58■■□□□ 1.21
PTPN4-207ENST00000460162 BRD8Q9H0E9 1235 aa22.58■■□□□ 1.21
PTPN4-207ENST00000460162 NFKBIL1Q9UBC1 381 aaPredicted RBP22.58■■□□□ 1.21
PTPN4-207ENST00000460162 SLC1A1P43005 524 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 DCDC1P59894 354 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 ODF2Q5BJF6 829 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 LYSMD3Q7Z3D4 306 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 RHOT1Q8IXI2 618 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 CCDC112Q8NEF3 446 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 CEP41Q9BYV8 373 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 ZMYND15Q9H091 742 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 STN1Q9H668 368 aaKnown RBP22.57■■□□□ 1.2
PTPN4-207ENST00000460162 ZFYVE1Q9HBF4 777 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 DDX56Q9NY93 547 aaKnown RBP22.57■■□□□ 1.2
PTPN4-207ENST00000460162 ZNHIT2Q9UHR6 403 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 INTUQ9ULD6 942 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 PCDHB11Q9Y5F2 797 aa22.57■■□□□ 1.2
PTPN4-207ENST00000460162 PCYT1BQ9Y5K3 369 aaPredicted RBP22.57■■□□□ 1.2
PTPN4-207ENST00000460162 SDK2Q58EX2 2172 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 EFSO43281 561 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 DUX1O43812 170 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 SLC2A4P14672 509 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 TCEAL1Q15170 157 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 ZNF569Q5MCW4 686 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 MANEAQ5SRI9 462 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.56■■□□□ 1.2
PTPN4-207ENST00000460162 NKAIN2Q5VXU1 208 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 CHST15Q7LFX5 561 aaPredicted RBP22.56■■□□□ 1.2
PTPN4-207ENST00000460162 ZNF605Q86T29 641 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 NT5DC3Q86UY8 548 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 ZFAND4Q86XD8 727 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 DTX1Q86Y01 620 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 RFX6Q8HWS3 928 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 CNGA4Q8IV77 575 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 AGBL5Q8NDL9 886 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 OR10G6Q8NH81 332 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 SLC38A3Q99624 504 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 HERPUD2Q9BSE4 406 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 SLC25A51Q9H1U9 297 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 CARD9Q9H257 536 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 SARS2Q9NP81 518 aaKnown RBP22.56■■□□□ 1.2
PTPN4-207ENST00000460162 RAD18Q9NS91 495 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 PCDHGA3Q9Y5H0 932 aa22.56■■□□□ 1.2
PTPN4-207ENST00000460162 CCL4P13236 92 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 HHEXQ03014 270 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 LY6DQ14210 128 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 TMEM71Q6P5X7 295 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 NPNTQ6UXI9 565 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 TADA1Q96BN2 335 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 SGF29Q96ES7 293 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 MED8Q96G25 268 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 AGAP3Q96P47 875 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 ZSCAN5AQ9BUG6 496 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 SEMA4CQ9C0C4 833 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 TSPY26PQ9H489 355 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 MAGEE1Q9HCI5 957 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 ZNF711Q9Y462 761 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 PRKAB1Q9Y478 270 aa22.55■■□□□ 1.2
PTPN4-207ENST00000460162 PIEZO2Q9H5I5 2752 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms