RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SIPA1Q96FS4 1042 aa9.73□□□□□ -0.85
UFD1-205ENST00000459854 SLC39A8Q9C0K1 460 aa9.73□□□□□ -0.85
UFD1-205ENST00000459854 PIF1Q9H611 641 aa9.73□□□□□ -0.85
UFD1-205ENST00000459854 CDHR5Q9HBB8 845 aa9.73□□□□□ -0.85
UFD1-205ENST00000459854 FBXO6Q9NRD1 293 aaPredicted RBP9.73□□□□□ -0.85
UFD1-205ENST00000459854 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
UFD1-205ENST00000459854 MGAT4AQ9UM21 535 aa9.73□□□□□ -0.85
UFD1-205ENST00000459854 AGPSO00116 658 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 TREHO43280 583 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A9O60656 530 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 CPB1P15086 417 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A6P19224 532 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A1P22309 533 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A4P22310 534 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 IGFBP5P24593 272 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A3P35503 534 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A5P35504 534 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 RBM34P42696 430 aaKnown RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 SUZ12Q15022 739 aaKnown RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 AKIRIN2Q53H80 203 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 VWA5B1Q5TIE3 1220 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SULT1C3Q6IMI6 304 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 MPZL3Q6UWV2 235 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 PTCHD4Q6ZW05 846 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZSWIM2Q8NEG5 633 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 TOR1AIP2Q8NFQ8 470 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 MCOLN3Q8TDD5 553 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 KCTD4Q8WVF5 259 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A7Q9HAW7 530 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A10Q9HAW8 530 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 UGT1A8Q9HAW9 530 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 DPP3Q9NY33 737 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 CCRL2O00421 344 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 PDPK1O15530 556 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 DGKAP23743 735 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SLC6A4P31645 630 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SEPHS1P49903 392 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 MARSP56192 900 aaKnown RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 PRKCQQ04759 706 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 PTP4A2Q12974 167 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZNF177Q13360 481 aaPredicted RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 IL27RAQ6UWB1 636 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZNF621Q6ZSS3 439 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZNF438Q7Z4V0 828 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 C7orf61Q8IZ16 206 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 GJD3Q8N144 294 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 TRPV3Q8NET8 790 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZFP28Q8NHY6 868 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZNF285Q96NJ3 590 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SAE1Q9UBE0 346 aaPredicted RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 SLC25A13Q9UJS0 675 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SLC9A8Q9Y2E8 581 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 NCF1BA6NI72 391 aaPredicted RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 NCF1CA8MVU1 366 aaPredicted RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 PSMD11O00231 422 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 PLOD2O00469 737 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 CCNT2O60583 730 aaKnown RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 PEX11AO75192 247 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SLC22A3O75751 556 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 NCF1P14598 390 aaPredicted RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 SLC7A1P30825 629 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 HOXC8P31273 242 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 RORCP51449 518 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 MAZP56270 477 aaKnown RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 DLG1Q12959 904 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 USP4Q13107 963 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SNAP47Q5SQN1 464 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 HECTD3Q5T447 861 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 OLFML2AQ68BL7 652 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 R3HCC1LQ7Z5L2 792 aaKnown RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 TEX47Q8TBZ9 253 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ZNF606Q8WXB4 792 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 CREB3L1Q96BA8 519 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 CCDC115Q96NT0 180 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 FAM126AQ9BYI3 521 aaPredicted RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 TMEM134Q9H6X4 195 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 KCNK1O00180 336 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ACKR2O00590 384 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 AP3D1O14617 1153 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 AZIN1O14977 448 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SUV39H1O43463 412 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ITGA10O75578 1167 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 COX7A2P14406 83 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 PEX2P28328 305 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 AQP4P55087 323 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SOX10P56693 466 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 IL2P60568 153 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ACSM2AQ08AH3 577 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ACSM2BQ68CK6 577 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 TMEM53Q6P2H8 277 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 TRIM40Q6P9F5 258 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SV2AQ7L0J3 742 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 TMEM139Q8IV31 216 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 ASCC1Q8N9N2 400 aaKnown RBP9.72□□□□□ -0.85
UFD1-205ENST00000459854 OR2T12Q8NG77 320 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 TAS1R2Q8TE23 839 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms