RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 FAM46DQ8NEK8 389 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 GPBAR1Q8TDU6 330 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 GLYATL1Q969I3 302 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 OR2M4Q96R27 311 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 APOL2Q9BQE5 337 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 GORASP1Q9BQQ3 440 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 TMEM168Q9H0V1 697 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 BPIFA1Q9NP55 256 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 GULP1Q9UBP9 304 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 ZNHIT2Q9UHR6 403 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 APPL1Q9UKG1 709 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 CNOT6Q9ULM6 557 aaKnown RBP16.03■□□□□ 0.16
CD28-203ENST00000458610 PADI4Q9UM07 663 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 MSRB2Q9Y3D2 182 aa16.03■□□□□ 0.16
CD28-203ENST00000458610 TP53BP1Q12888 1972 aaPredicted RBP16.03■□□□□ 0.16
CD28-203ENST00000458610 CPED1A4D0V7 1026 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 EME2A4GXA9 379 aaPredicted RBP16.02■□□□□ 0.16
CD28-203ENST00000458610 FADS2P1A8MWK0 482 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 AP2A1O95782 977 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 POLD2P49005 469 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 ITGA9Q13797 1035 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 SMAD1Q15797 465 aaKnown RBP16.02■□□□□ 0.16
CD28-203ENST00000458610 KCTD11Q693B1 232 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 OGFOD3Q6PK18 319 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 DHRS13Q6UX07 377 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 CACTIN-AS1Q8N1I8 211 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 RASGEF1CQ8N431 466 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 PDCD7Q8N8D1 485 aaKnown RBP16.02■□□□□ 0.16
CD28-203ENST00000458610 TTC25Q96NG3 672 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 VPS35Q96QK1 796 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 DPEP2Q9H4A9 486 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 SUDS3Q9H7L9 328 aaPredicted RBP16.02■□□□□ 0.16
CD28-203ENST00000458610 TTC7AQ9ULT0 858 aaPredicted RBP16.02■□□□□ 0.16
CD28-203ENST00000458610 WASF3Q9UPY6 502 aa16.02■□□□□ 0.16
CD28-203ENST00000458610 SPTBN2O15020 2390 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 GLYATL1P3A0A0U1RQE8 302 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 AP3B1O00203 1094 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 CES2O00748 559 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 ZW10O43264 779 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 VEGFDO43915 354 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 ATP1A1P05023 1023 aaKnown RBP16.01■□□□□ 0.15
CD28-203ENST00000458610 JUPP14923 745 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 ADCY8P40145 1251 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 HADHAP40939 763 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 SPARCL1Q14515 664 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 SIX1Q15475 284 aaPredicted RBP16.01■□□□□ 0.15
CD28-203ENST00000458610 PYCR3Q53H96 274 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 MARK2Q7KZI7 788 aaKnown RBP16.01■□□□□ 0.15
CD28-203ENST00000458610 WDR48Q8TAF3 677 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 GDAP1Q8TB36 358 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 IFI44Q8TCB0 444 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 ZCCHC2Q9C0B9 1178 aaKnown RBP16.01■□□□□ 0.15
CD28-203ENST00000458610 CAAP1Q9H8G2 361 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 ETNK1Q9HBU6 452 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 IL26Q9NPH9 171 aa16.01■□□□□ 0.15
CD28-203ENST00000458610 TDRD6O60522 2096 aaKnown RBP16.01■□□□□ 0.15
CD28-203ENST00000458610 NUAK1O60285 661 aa16■□□□□ 0.15
CD28-203ENST00000458610 USP12O75317 370 aa16■□□□□ 0.15
CD28-203ENST00000458610 FUCA1P04066 466 aa16■□□□□ 0.15
CD28-203ENST00000458610 CELA2BP08218 269 aaPredicted RBP16■□□□□ 0.15
CD28-203ENST00000458610 CTBSQ01459 385 aa16■□□□□ 0.15
CD28-203ENST00000458610 CDH17Q12864 832 aa16■□□□□ 0.15
CD28-203ENST00000458610 BIRC2Q13490 618 aa16■□□□□ 0.15
CD28-203ENST00000458610 GTF2H3Q13889 308 aa16■□□□□ 0.15
CD28-203ENST00000458610 LDLRAP1Q5SW96 308 aa16■□□□□ 0.15
CD28-203ENST00000458610 DENND5AQ6IQ26 1287 aa16■□□□□ 0.15
CD28-203ENST00000458610 PPP1R21Q6ZMI0 780 aa16■□□□□ 0.15
CD28-203ENST00000458610 EFL1Q7Z2Z2 1120 aaKnown RBP16■□□□□ 0.15
CD28-203ENST00000458610 TRIM74Q86UV6 250 aa16■□□□□ 0.15
CD28-203ENST00000458610 SLC35F3Q8IY50 421 aa16■□□□□ 0.15
CD28-203ENST00000458610 DNAAF3Q8N9W5 541 aa16■□□□□ 0.15
CD28-203ENST00000458610 MAPK15Q8TD08 544 aa16■□□□□ 0.15
CD28-203ENST00000458610 ZNF398Q8TD17 642 aa16■□□□□ 0.15
CD28-203ENST00000458610 RAB6BQ9NRW1 208 aa16■□□□□ 0.15
CD28-203ENST00000458610 GOLGA6L10A0A0M3HER8 536 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 PGRMC1O00264 195 aaKnown RBP15.99■□□□□ 0.15
CD28-203ENST00000458610 GRID2O43424 1007 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 DNAJC6O75061 913 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 SUN1O94901 812 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 CDK14O94921 469 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 SLC2A4P14672 509 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 TCP1P17987 556 aaKnown RBP15.99■□□□□ 0.15
CD28-203ENST00000458610 ACTR1BP42025 376 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 ACTR1AP61163 376 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 GNG11P61952 73 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 SEMA5AQ13591 1074 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 TCEA2Q15560 299 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 KCTD16Q68DU8 428 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 CCNI2Q6ZMN8 369 aaPredicted RBP15.99■□□□□ 0.15
CD28-203ENST00000458610 NYAP1Q6ZVC0 841 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 TAB3Q8N5C8 712 aaPredicted RBP15.99■□□□□ 0.15
CD28-203ENST00000458610 GPR156Q8NFN8 814 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 OR4K2Q8NGD2 314 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 ACTRT1Q8TDG2 376 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 HEXDCQ8WVB3 486 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 MAGOHBQ96A72 148 aaKnown RBP15.99■□□□□ 0.15
CD28-203ENST00000458610 OSBPL9Q96SU4 736 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 OR2AG1Q9H205 316 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 TAAR2Q9P1P5 351 aa15.99■□□□□ 0.15
CD28-203ENST00000458610 SIRPGQ9P1W8 387 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms