RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 AGRPO00253 132 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 MTX2O75431 263 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 SLC25A14O95258 325 aaPredicted RBP18.54■□□□□ 0.56
USP39-209ENST00000458268 IFNB1P01574 187 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 IVLP07476 585 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 GDF10P55107 478 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 MAZP56270 477 aaKnown RBP18.54■□□□□ 0.56
USP39-209ENST00000458268 KLF1Q13351 362 aaPredicted RBP18.54■□□□□ 0.56
USP39-209ENST00000458268 PLA2G4EQ3MJ16 856 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 LVRNQ6Q4G3 990 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 CRTC3Q6UUV7 619 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 CHST15Q7LFX5 561 aaPredicted RBP18.54■□□□□ 0.56
USP39-209ENST00000458268 TMEM121BQ9BXQ6 578 aaPredicted RBP18.54■□□□□ 0.56
USP39-209ENST00000458268 OR2AG1Q9H205 316 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 RAD18Q9NS91 495 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 SPATS2LQ9NUQ6 558 aaKnown RBP18.54■□□□□ 0.56
USP39-209ENST00000458268 TAAR2Q9P1P5 351 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 AAR2Q9Y312 384 aaKnown RBP18.54■□□□□ 0.56
USP39-209ENST00000458268 AK5Q9Y6K8 562 aa18.54■□□□□ 0.56
USP39-209ENST00000458268 TRBV23OR9-2A0A075B6M9 112 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 RGSL1A5PLK6 1076 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 FAM221BA6H8Z2 402 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 ACP5P13686 325 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 PTPRCAPQ14761 206 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 FAM151BQ6UXP7 276 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 NRROSQ86YC3 692 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 SLC13A5Q86YT5 568 aaPredicted RBP18.53■□□□□ 0.56
USP39-209ENST00000458268 SDR16C5Q8N3Y7 309 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 TTC30BQ8N4P2 665 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 TRAM1L1Q8N609 369 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 ZDHHC1Q8WTX9 485 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 PATE1Q8WXA2 126 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 LRRC45Q96CN5 670 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 COX14Q96I36 57 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 SRPK1Q96SB4 655 aaKnown RBP18.53■□□□□ 0.56
USP39-209ENST00000458268 TBL1YQ9BQ87 522 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 ZSCAN5AQ9BUG6 496 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 CCDC86Q9H6F5 360 aaKnown RBP18.53■□□□□ 0.56
USP39-209ENST00000458268 TRNAU1APQ9NX07 287 aaKnown RBP18.53■□□□□ 0.56
USP39-209ENST00000458268 HACD3Q9P035 362 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 CNOT6Q9ULM6 557 aaKnown RBP18.53■□□□□ 0.56
USP39-209ENST00000458268 ZNF148Q9UQR1 794 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 PKP3Q9Y446 797 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 PCDHB1Q9Y5F3 818 aa18.53■□□□□ 0.56
USP39-209ENST00000458268 STX7O15400 261 aaKnown RBP18.52■□□□□ 0.56
USP39-209ENST00000458268 SNX2O60749 519 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 CSO75390 466 aaKnown RBP18.52■□□□□ 0.56
USP39-209ENST00000458268 GP1BAP07359 652 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 CXCR5P32302 372 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 SPAM1P38567 509 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 TMPRSS15P98073 1019 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 CYP4F3Q08477 520 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 C14orf28Q4W4Y0 310 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 FOXR1Q6PIV2 292 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 NLRP8Q86W28 1048 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 PHYKPLQ8IUZ5 450 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 TRIM58Q8NG06 486 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 GPBAR1Q8TDU6 330 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 DEPDC7Q96QD5 511 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 ZMYND15Q9H091 742 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 TRABDQ9H4I3 376 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 PIH1D1Q9NWS0 290 aaKnown RBP18.52■□□□□ 0.56
USP39-209ENST00000458268 RABGEF1Q9UJ41 708 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 ZMIZ1Q9ULJ6 1067 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 KCNK6Q9Y257 313 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 PCYT1BQ9Y5K3 369 aaPredicted RBP18.52■□□□□ 0.56
USP39-209ENST00000458268 ARL5AQ9Y689 179 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 IGF2RP11717 2491 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 SPEGQ15772 3267 aa18.52■□□□□ 0.56
USP39-209ENST00000458268 C5orf60A6NFR6 353 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 GPR39O43194 453 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 CEP104O60308 925 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 NOBOXO60393 691 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 METTL18O95568 372 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 EPOP01588 193 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 RPLP0P05388 317 aaKnown RBP18.51■□□□□ 0.55
USP39-209ENST00000458268 LMAN1P49257 510 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 SEPT6Q14141 434 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 SPIDRQ14159 915 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 PYCR3Q53H96 274 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 PRUNE1Q86TP1 453 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 RAVER1Q8IY67 606 aaKnown RBP18.51■□□□□ 0.55
USP39-209ENST00000458268 PDCD7Q8N8D1 485 aaKnown RBP18.51■□□□□ 0.55
USP39-209ENST00000458268 SLC35B2Q8TB61 432 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 GLYATL1Q969I3 302 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 OSGEPL1Q9H4B0 414 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 ATXN10Q9UBB4 475 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 KCTD3Q9Y597 815 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 RNF215Q9Y6U7 377 aa18.51■□□□□ 0.55
USP39-209ENST00000458268 KNTC1P50748 2209 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 RHPN2P1A8MT19 583 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 GRID2O43424 1007 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 LIASO43766 372 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A9O60656 530 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 ZNF189O75820 626 aaPredicted RBP18.5■□□□□ 0.55
USP39-209ENST00000458268 ECEL1O95672 775 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 ZNF8P17098 575 aaPredicted RBP18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A6P19224 532 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A1P22309 533 aa18.5■□□□□ 0.55
USP39-209ENST00000458268 UGT1A4P22310 534 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms