RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TBR1Q16650 682 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 MANEAQ5SRI9 462 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 NRSN1Q8IZ57 195 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 EXD1Q8NHP7 514 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 SLC35G2Q8TBE7 412 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 ARRDC2Q8TBH0 407 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 CCHCR1Q8TD31 782 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 JPH3Q8WXH2 748 aaPredicted RBP15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 FATE1Q969F0 183 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 TMEM159Q96B96 161 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 CCDC42Q96M95 316 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 RNF157Q96PX1 679 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 AGAP2Q99490 1192 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 ABHD10Q9NUJ1 306 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 SPTLC3Q9NUV7 552 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 PKD2L2Q9NZM6 624 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 RPL26L1Q9UNX3 145 aaKnown RBP15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 PLEKHM1Q9Y4G2 1056 aa15.65■□□□□ 0.1
CHCHD3-204ENST00000457942 RELNP78509 3460 aa15.64■□□□□ 0.1
CHCHD3-204ENST00000457942 LRRK2Q5S007 2527 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 PRAMEF33A0A0G2JMD5 474 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 PRAMEF10O60809 474 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 DYNLT1P63172 113 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 B4GALNT1Q00973 533 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 ZFP36L1Q07352 338 aaKnown RBP15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 PPIDQ08752 370 aaKnown RBP15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 SLC10A2Q12908 348 aaPredicted RBP15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 GALNT3Q14435 633 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 CLCA4Q14CN2 919 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 ZFAND4Q86XD8 727 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 RFX6Q8HWS3 928 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 SLITRK4Q8IW52 837 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 HTR3CQ8WXA8 447 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 NUDT22Q9BRQ3 303 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 MLPHQ9BV36 600 aaPredicted RBP15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 ADGRE3Q9BY15 652 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 CEP41Q9BYV8 373 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 SEMA6CQ9H3T2 930 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 ZNHIT2Q9UHR6 403 aa15.64■□□□□ 0.09
CHCHD3-204ENST00000457942 PPP1R12AO14974 1030 aaPredicted RBP15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 B4GAT1O43505 415 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 MFAP3LO75121 409 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 PPFIA2O75334 1257 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 ATP1A1P05023 1023 aaKnown RBP15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 ITGB2P05107 769 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 LIPCP11150 499 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 ZBTB17Q13105 803 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 LRP8Q14114 963 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 IHHQ14623 411 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 ASTE1Q2TB18 679 aaPredicted RBP15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 PYCR3Q53H96 274 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 TMEM164Q5U3C3 297 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 TMPRSS9Q7Z410 1059 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 KDELC2Q7Z4H8 507 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 ZNF438Q7Z4V0 828 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 VSTM4Q8IW00 320 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 RHOT2Q8IXI1 618 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 NAGSQ8N159 534 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 PLD5Q8N7P1 536 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 RCBTB1Q8NDN9 531 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 USP7Q93009 1102 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 AHCYL2Q96HN2 611 aaKnown RBP15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 CHP1Q99653 195 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 STN1Q9H668 368 aaKnown RBP15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 NHEJ1Q9H9Q4 299 aaPredicted RBP15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 KCNK4Q9NYG8 393 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 FOXJ2Q9P0K8 574 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 PRKAB1Q9Y478 270 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 PCDHB11Q9Y5F2 797 aa15.63■□□□□ 0.09
CHCHD3-204ENST00000457942 TRBV23OR9-2A0A075B6M9 112 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 NVLO15381 856 aaKnown RBP15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 SPOPO43791 374 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 PRLP01236 227 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 ZFXP17010 805 aaPredicted RBP15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 ETV5P41161 510 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 ARHGAP25P42331 645 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 GPR3P46089 330 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 SPINT3P49223 89 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 IFI35P80217 286 aaPredicted RBP15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 C16orf72Q14CZ0 275 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 PDK1Q15118 436 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 PCSK7Q16549 785 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 QPCTQ16769 361 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 SKIDA1Q1XH10 827 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 NKAIN2Q5VXU1 208 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 ALS2CLQ60I27 953 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 CHST15Q7LFX5 561 aaPredicted RBP15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 NLRP8Q86W28 1048 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 C17orf82Q86X59 251 aaPredicted RBP15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 ZNF761Q86XN6 746 aaPredicted RBP15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 RNF25Q96BH1 459 aaPredicted RBP15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 COX14Q96I36 57 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 CCDC74BQ96LY2 380 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 AGAP3Q96P47 875 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 SLC38A3Q99624 504 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 EPN3Q9H201 632 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 FAM83DQ9H4H8 585 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 ST14Q9Y5Y6 855 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 AHCTF1Q8WYP5 2266 aa15.62■□□□□ 0.09
CHCHD3-204ENST00000457942 ANKRD66B4E2M5 251 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms