RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 GUSBP11Q6P575 273 aa23■■□□□ 1.27
CBX3-204ENST00000456948 OGFOD3Q6PK18 319 aa23■■□□□ 1.27
CBX3-204ENST00000456948 SLC13A5Q86YT5 568 aaPredicted RBP23■■□□□ 1.27
CBX3-204ENST00000456948 SLC35B2Q8TB61 432 aa23■■□□□ 1.27
CBX3-204ENST00000456948 U3KQA8 63 aa23■■□□□ 1.27
CBX3-204ENST00000456948 SPEGQ15772 3267 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 AKAP13Q12802 2813 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 ZSCAN12O43309 604 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 BPIP17213 487 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 MSNP26038 577 aaKnown RBP22.99■■□□□ 1.27
CBX3-204ENST00000456948 TARDBPQ13148 414 aaKnown RBP eCLIP22.99■■□□□ 1.27
CBX3-204ENST00000456948 RANBP10Q6VN20 620 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 MARK2Q7KZI7 788 aaKnown RBP22.99■■□□□ 1.27
CBX3-204ENST00000456948 PHYKPLQ8IUZ5 450 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 GPR26Q8NDV2 337 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 GRAMD1AQ96CP6 724 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 EID2BQ96D98 161 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 WDR24Q96S15 920 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 TRIM39Q9HCM9 518 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 ZNF148Q9UQR1 794 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 SPO11Q9Y5K1 396 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 LRP4O75096 1905 aa22.99■■□□□ 1.27
CBX3-204ENST00000456948 B4DGG1 531 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 STX7O15400 261 aaKnown RBP22.98■■□□□ 1.27
CBX3-204ENST00000456948 CRTAMO95727 393 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 AGTP01019 485 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 CHRNA4P43681 627 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 CTBSQ01459 385 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 PYCR3Q53H96 274 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 TRIM74Q86UV6 250 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 KDF1Q8NAX2 398 aaPredicted RBP22.98■■□□□ 1.27
CBX3-204ENST00000456948 KYQ8NBH2 561 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 DTX3LQ8TDB6 740 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 ZCCHC14Q8WYQ9 949 aaKnown RBP22.98■■□□□ 1.27
CBX3-204ENST00000456948 GLYATL1Q969I3 302 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 TMEM121Q9BTD3 319 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 CCDC86Q9H6F5 360 aaKnown RBP22.98■■□□□ 1.27
CBX3-204ENST00000456948 BPIFA1Q9NP55 256 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 TAAR2Q9P1P5 351 aa22.98■■□□□ 1.27
CBX3-204ENST00000456948 CNOT6Q9ULM6 557 aaKnown RBP22.98■■□□□ 1.27
CBX3-204ENST00000456948 TRABD2BA6NFA1 517 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 FADS2P1A8MWK0 482 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 TCEA3O75764 348 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 ATP1A1P05023 1023 aaKnown RBP22.97■■□□□ 1.27
CBX3-204ENST00000456948 PNLIPP16233 465 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 GLB1P16278 677 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 SPAM1P38567 509 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 C14orf28Q4W4Y0 310 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 KCTD16Q68DU8 428 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 SLC30A9Q6PML9 568 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 NYAP1Q6ZVC0 841 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 DCBLD1Q8N8Z6 715 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 GPR156Q8NFN8 814 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 BRSK1Q8TDC3 778 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 ZDHHC1Q8WTX9 485 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 NXPE2Q96DL1 559 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 TTC25Q96NG3 672 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 TBL1YQ9BQ87 522 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 CCDC3Q9BQI4 270 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 LRRC40Q9H9A6 602 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 HOMER3Q9NSC5 361 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 R3HDM2Q9Y2K5 976 aaKnown RBP22.97■■□□□ 1.27
CBX3-204ENST00000456948 ZKSCAN5Q9Y2L8 839 aa22.97■■□□□ 1.27
CBX3-204ENST00000456948 KMT2BQ9UMN6 2715 aaPredicted RBP22.96■■□□□ 1.27
CBX3-204ENST00000456948 ASXL3Q9C0F0 2248 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 AURKAO14965 403 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 GAS8O95995 478 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 FUCA1P04066 466 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 LPOP22079 712 aaPredicted RBP22.96■■□□□ 1.27
CBX3-204ENST00000456948 ACTR1BP42025 376 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 ACTR1AP61163 376 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 ITGA9Q13797 1035 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 GTF2H3Q13889 308 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 TAF1AQ15573 450 aaPredicted RBP22.96■■□□□ 1.27
CBX3-204ENST00000456948 RBM44Q6ZP01 1051 aaKnown RBP22.96■■□□□ 1.27
CBX3-204ENST00000456948 CCDC89Q8N998 374 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 CCL4L1Q8NHW4 92 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 GDAP1Q8TB36 358 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 VPS35Q96QK1 796 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 IL17CQ9P0M4 197 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 PLXNB3Q9ULL4 1909 aa22.96■■□□□ 1.27
CBX3-204ENST00000456948 TCRBV7S2A1N4TA0A589 114 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 TMX2-CTNND1H3BSU7 103 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 GRID2O43424 1007 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 LIASO43766 372 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 NUDT21O43809 227 aaKnown RBP22.95■■□□□ 1.26
CBX3-204ENST00000456948 VEGFDO43915 354 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 NUAK1O60285 661 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 SLC2A4P14672 509 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 ADRA1AP35348 466 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 SPIDRQ14159 915 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 CERCAMQ5T4B2 595 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 CDCP2Q5VXM1 449 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 LINC00523Q86TU6 105 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 TTC30BQ8N4P2 665 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 ZCCHC2Q9C0B9 1178 aaKnown RBP22.95■■□□□ 1.26
CBX3-204ENST00000456948 NRSN2Q9GZP1 204 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 SYNDIG1Q9H7V2 258 aa22.95■■□□□ 1.26
CBX3-204ENST00000456948 SPATS2LQ9NUQ6 558 aaKnown RBP22.95■■□□□ 1.26
CBX3-204ENST00000456948 APPL1Q9UKG1 709 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms