RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
LINC00959-201ENST00000456581 ATP11BQ9Y2G3 1177 aa12.38□□□□□ -0.43
LINC00959-201ENST00000456581 TRPC5OSA6NMA1 111 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 WASH4PA8MWX3 477 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 H6PDO95479 791 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 C8BP07358 591 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 ZDHHC11BP0C7U3 371 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 NCK1P16333 377 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 ITGB8P26012 769 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 PRKCQQ04759 706 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 HERC3Q15034 1050 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 GEN1Q17RS7 908 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SLC39A5Q6ZMH5 540 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 PIWIL4Q7Z3Z4 852 aaKnown RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 KLHDC8BQ8IXV7 354 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 DCBLD1Q8N8Z6 715 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 C2CD4AQ8NCU7 369 aaPredicted RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 OR6P1Q8NGX9 317 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SGCDQ92629 289 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 PTERQ96BW5 349 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 IMP4Q96G21 291 aaKnown RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 CYP2S1Q96SQ9 504 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SUCOQ9UBS9 1254 aaKnown RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 MID2Q9UJV3 735 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 ZNF711Q9Y462 761 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 TRAF6Q9Y4K3 522 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 NME4O00746 187 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 COCHO43405 550 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SUPT3HO75486 399 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 ATE1O95260 518 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SNRPB2P08579 225 aaKnown RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 RENBPP51606 427 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 RPL26P61254 145 aaKnown RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SH3BP2P78314 561 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 DEFB103AP81534 67 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 TNK2Q07912 1038 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 CD300CQ08708 224 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 RFTN1Q14699 578 aaPredicted RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 USP41Q3LFD5 358 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SCIMPQ6UWF3 145 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 C16orf59Q7L2K0 433 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 CLVS1Q8IUQ0 354 aaPredicted RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 CATSPER1Q8NEC5 780 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 ARRDC2Q8TBH0 407 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 IGSF21Q96ID5 467 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SPATA17Q96L03 361 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 FAM210AQ96ND0 272 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SPON2Q9BUD6 331 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 SLC25A51Q9H1U9 297 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 GSTO2Q9H4Y5 243 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 TREX1Q9NSU2 369 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 NDUFA13Q9P0J0 144 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
LINC00959-201ENST00000456581 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 ZFP37Q9Y6Q3 630 aaPredicted RBP12.37□□□□□ -0.43
LINC00959-201ENST00000456581 CHD9Q3L8U1 2897 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 A0A0U1RQS6 177 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 H3BNH8 94 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 ZSCAN9O15535 394 aaPredicted RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 NRP2O60462 931 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 ATP6V1G1O75348 118 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 HMGA1P17096 107 aaKnown RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 PRKAA2P54646 552 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 PLD1Q13393 1074 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 SERINC3Q13530 473 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 C16orf72Q14CZ0 275 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 POTEHQ6S545 545 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 DTNBP1Q96EV8 351 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 RMND5BQ96G75 393 aaPredicted RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 SLC22A12Q96S37 553 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 MRPL9Q9BYD2 267 aaKnown RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 ENTPD7Q9NQZ7 604 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 MAP10Q9P2G4 905 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 CROTQ9UKG9 612 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 OGDHLQ9ULD0 1010 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 ZNF840PA6NDX5 716 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 SLCO1B7G3V0H7 640 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 H7C4K7 107 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 NPHS1O60500 1241 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 CXCL10P02778 98 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 CAPNS1P04632 268 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 CAPN3P20807 821 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 HTR7P34969 479 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 RGRP47804 291 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 CLCN2P51788 898 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 ELAVL2Q12926 359 aaKnown RBP12.36□□□□□ -0.43
LINC00959-201ENST00000456581 GALNT3Q14435 633 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 PTPRRQ15256 657 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 FUT11Q495W5 492 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 NHSL2Q5HYW2 709 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 SLC8B1Q6J4K2 584 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 DHFR2Q86XF0 187 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 CNTN4Q8IWV2 1026 aa12.36□□□□□ -0.43
LINC00959-201ENST00000456581 AKTIPQ9H8T0 292 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms