RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 RNASEH2AO75792 299 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 SRP72O76094 671 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 CORO1AP31146 461 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 OR1D2P34982 312 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 SH3BGRP55822 239 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 TLR1Q15399 786 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 LRRC23Q53EV4 343 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 MARVELD2Q8N4S9 558 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 DRAXINQ8NBI3 349 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 TRPC4APQ8TEL6 797 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 BIRC8Q96P09 236 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 PCDHAC1Q9H158 963 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 TUBB1Q9H4B7 451 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 HMX1Q9NP08 348 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 GKN1Q9NS71 199 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 FAM50BQ9Y247 325 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 PTGDR2Q9Y5Y4 395 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 BACE2Q9Y5Z0 518 aa18.29■□□□□ 0.52
SEMA3B-209ENST00000456560 ECI2O75521 394 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 SEC24AO95486 1093 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 GFAPP14136 432 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 LPOP22079 712 aaPredicted RBP18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 CDKN1CP49918 316 aaPredicted RBP18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 STX1BP61266 288 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 RAD51Q06609 339 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 FAM43BQ6ZT52 329 aaPredicted RBP18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 LPCAT1Q8NF37 534 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 WBP2Q969T9 261 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 DUS3LQ96G46 650 aaKnown RBP18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 EPS15L1Q9UBC2 864 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 GALPQ9UBC7 116 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 RAB26Q9ULW5 256 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 RAI2Q9Y5P3 530 aa18.28■□□□□ 0.52
SEMA3B-209ENST00000456560 C15orf38-AP3S2A0A0A6YYH1 394 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 A0A1B0GVM2 712 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 KLK8O60259 260 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 PGM3O95394 542 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 CD160O95971 181 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 EEF1DP29692 281 aaKnown RBP18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 CLCQ05315 142 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 IL23RQ5VWK5 629 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 CXorf57Q6NSI4 855 aaKnown RBP18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 ARPINQ7Z6K5 226 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 FBXO39Q8N4B4 442 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 ROPN1LQ96C74 230 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 GPR21Q99679 349 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 VN1R3Q9BXE9 311 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 GIMAP2Q9UG22 337 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 RNF112Q9ULX5 631 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 PCDHGC4Q9Y5F7 938 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 A0A1B0GTL3 188 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 SUPT3HB4E1H0 165 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 CBX4O00257 560 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 CDC7O00311 574 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 SUPT3HO75486 399 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 OR6B1O95007 311 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 RPS17P08708 135 aaKnown RBP18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 CD9P21926 228 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 RHDQ02161 417 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 RALGDSQ12967 914 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 LCP2Q13094 533 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 MAP7Q14244 749 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 GRB7Q14451 532 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 PTPRNQ16849 979 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 ADGRF1Q5T601 910 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 RNF219Q5W0B1 726 aaPredicted RBP18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 RETREG3Q86VR2 466 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 PIANPQ8IYJ0 282 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 FUBP1Q96AE4 644 aaKnown RBP18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 NMD3Q96D46 503 aaKnown RBP18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 KCNA7Q96RP8 456 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 C1QTNF3Q9BXJ4 246 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 KLF16Q9BXK1 252 aaPredicted RBP18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 CCDC68Q9H2F9 335 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 NDUFA13Q9P0J0 144 aa18.27■□□□□ 0.52
SEMA3B-209ENST00000456560 BBIP1A8MTZ0 92 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 TSPAN3O60637 253 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 SPATA31D3P0C874 917 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 ARF5P84085 180 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 TSNQ15631 228 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 USP41Q3LFD5 358 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 SAMD4BQ5PRF9 694 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 C6orf10Q5SRN2 563 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 LAYNQ6UX15 382 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 SPATA31D4Q6ZUB0 917 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 RNF168Q8IYW5 571 aaPredicted RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 TTC30BQ8N4P2 665 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 NKAPQ8N5F7 415 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 ATP6V1E2Q96A05 226 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 MYRFLQ96LU7 910 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 SLC30A3Q99726 388 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 GPATCH1Q9BRR8 931 aaKnown RBP18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 RNF38Q9H0F5 515 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 OCEL1Q9H607 264 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 MAP10Q9P2G4 905 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 FKBPLQ9UIM3 349 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 A0A0J9YYE9 177 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 TCRBV3S1A0A5B6 114 aa18.26■□□□□ 0.51
SEMA3B-209ENST00000456560 ANKRD66B4E2M5 251 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms