RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 CEACAM20Q6UY09 585 aa12.29□□□□□ -0.44
TRA2B-206ENST00000456380 CHST15Q7LFX5 561 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-206ENST00000456380 NDUFAF2Q8N183 169 aa12.29□□□□□ -0.44
TRA2B-206ENST00000456380 C9orf43Q8TAL5 461 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-206ENST00000456380 KIAA1143Q96AT1 154 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-206ENST00000456380 ABHD17AQ96GS6 310 aa12.29□□□□□ -0.44
TRA2B-206ENST00000456380 WDR24Q96S15 920 aa12.29□□□□□ -0.44
TRA2B-206ENST00000456380 ZPBPQ9BS86 351 aa12.29□□□□□ -0.44
TRA2B-206ENST00000456380 MRPL47Q9HD33 250 aaKnown RBP12.29□□□□□ -0.44
TRA2B-206ENST00000456380 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
TRA2B-206ENST00000456380 TMEM184BQ9Y519 407 aaPredicted RBP12.29□□□□□ -0.44
TRA2B-206ENST00000456380 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
TRA2B-206ENST00000456380 A6NCN8 305 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 STK17BO94768 372 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 CLDN7O95471 211 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 PRLP01236 227 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 PYGLP06737 847 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 SERPINB6P35237 376 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 PRKCIP41743 596 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 EPHB1P54762 984 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 ITKQ08881 620 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 STX1AQ16623 288 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 DEFB109BQ30KR1 87 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 ATP1A1-AS1Q5TC04 95 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 CLEC17AQ6ZS10 378 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRA2B-206ENST00000456380 APOBEC4Q8WW27 367 aaKnown RBP12.28□□□□□ -0.44
TRA2B-206ENST00000456380 POLR1EQ9GZS1 481 aaKnown RBP12.28□□□□□ -0.44
TRA2B-206ENST00000456380 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
TRA2B-206ENST00000456380 VPS18Q9P253 973 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 KLHL3Q9UH77 587 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 KCNK6Q9Y257 313 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 CHKBQ9Y259 395 aa12.28□□□□□ -0.44
TRA2B-206ENST00000456380 NOTCH2Q04721 2471 aa12.27□□□□□ -0.44
TRA2B-206ENST00000456380 CLEC18AA5D8T8 446 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 DLGAP3O95886 979 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 MYBL1P10243 752 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 DSC2Q02487 901 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 ALG1LQ6GMV1 187 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 CLEC18BQ6UXF7 455 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 KDELC2Q7Z4H8 507 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 LRRC49Q8IUZ0 686 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 CLEC18CQ8NCF0 446 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 TEKT4Q8WW24 435 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 STARD8Q92502 1023 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 MAML1Q92585 1016 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 EFHD1Q9BUP0 239 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 TBC1D10AQ9BXI6 508 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 TDRD1Q9BXT4 1180 aaKnown RBP12.27□□□□□ -0.45
TRA2B-206ENST00000456380 ISCUQ9H1K1 167 aa12.27□□□□□ -0.45
TRA2B-206ENST00000456380 MRPS18BQ9Y676 258 aaKnown RBP12.27□□□□□ -0.45
TRA2B-206ENST00000456380 FADS2P1A8MWK0 482 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 POLR1CO15160 346 aaPredicted RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 SNX2O60749 519 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 CD48P09326 243 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 SKILP12757 684 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 ACP5P13686 325 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 F8A1P23610 371 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 MAN1A1P33908 653 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 GARSP41250 739 aaKnown RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 MAPK9P45984 424 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 EPHA4P54764 986 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 SLC25A11Q02978 314 aaKnown RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 KLHL30Q0D2K2 578 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 HENMT1Q5T8I9 393 aaKnown RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 SLC9B2Q86UD5 537 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 AOPEPQ8N6M6 819 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 ARRDC2Q8TBH0 407 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 SH3KBP1Q96B97 665 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 TRIM11Q96F44 468 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 BTBD6Q96KE9 485 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 TRIT1Q9H3H1 467 aaKnown RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 STN1Q9H668 368 aaKnown RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 SIDT1Q9NXL6 827 aaKnown RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 MATN3O15232 486 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 MFSD11O43934 449 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 F3P13726 295 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 TCN2P20062 427 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 STAT5AP42229 794 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 SPINT3P49223 89 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 NIPAL4Q0D2K0 466 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 GALNT2Q10471 571 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 PIGHQ14442 188 aaPredicted RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 CRTC2Q53ET0 693 aaPredicted RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 C16orf46Q6P387 395 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 LYSMD3Q7Z3D4 306 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 RAVER1Q8IY67 606 aaKnown RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 NIPA2Q8N8Q9 360 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 RNF31Q96EP0 1072 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 LYSMD1Q96S90 227 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 HERPUD2Q9BSE4 406 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.26□□□□□ -0.45
TRA2B-206ENST00000456380 PRDM8Q9NQV8 689 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 RBM22Q9NW64 420 aaKnown RBP eCLIP12.26□□□□□ -0.456e-18■■■■□ 23.9
TRA2B-206ENST00000456380 CPNE7Q9UBL6 633 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 DNPEPQ9ULA0 475 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 PLAAQ9Y263 795 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 RPS6KL1Q9Y6S9 549 aa12.26□□□□□ -0.45
TRA2B-206ENST00000456380 RP1L1Q8IWN7 2480 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms