RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RGSL1A5PLK6 1076 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 A6NCN8 305 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 TMEM191CA6NGB0 347 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 FZD6O60353 706 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 MAFKO60675 156 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 VPS4BO75351 444 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 TRBC1P01850 177 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 C9P02748 559 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 MT-ND3P03897 115 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 PCK1P35558 622 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 KLK7P49862 253 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 CLCNKAP51800 687 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 PMS2P54278 862 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 SNAP47Q5SQN1 464 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 C6orf15Q6UXA7 325 aaPredicted RBP14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 ASB18Q6ZVZ8 466 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 TSPAN33Q86UF1 283 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 PHYKPLQ8IUZ5 450 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 APLFQ8IW19 511 aaPredicted RBP14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 UNC5BQ8IZJ1 945 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 PIH1D2Q8WWB5 315 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 ERGIC2Q96RQ1 377 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 PEBP4Q96S96 227 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 CTRCQ99895 268 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 CUEDC1Q9NWM3 386 aaPredicted RBP14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 PCSK1NQ9UHG2 260 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 VPS4AQ9UN37 437 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 TMEM98Q9Y2Y6 226 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 SCINQ9Y6U3 715 aa14.16□□□□□ -0.14
LYSMD3-202ENST00000453259 A8MU76 341 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 LGALS16A8MUM7 142 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 DNAJC6O75061 913 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 MIPP30301 263 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 DLSTP36957 453 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 STC1P52823 247 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 PTSQ03393 145 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 BOLA3Q53S33 107 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 ALG1LQ6GMV1 187 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 C16orf46Q6P387 395 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 CYP4V2Q6ZWL3 525 aaPredicted RBP14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 PGBD5Q8N414 524 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 ARFGAP1Q8N6T3 406 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 EFCAB3Q8N7B9 438 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 PCMTD1Q96MG8 357 aaPredicted RBP14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 LYSMD1Q96S90 227 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 POLR1EQ9GZS1 481 aaKnown RBP14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 NUP62CLQ9H1M0 184 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 TBC1D29Q9UFV1 150 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 ZNHIT2Q9UHR6 403 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 PLEKHM1Q9Y4G2 1056 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 NOTCH2Q04721 2471 aa14.15□□□□□ -0.14
LYSMD3-202ENST00000453259 C21orf140B9A014 251 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 MTSS1O43312 755 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 LRCH4O75427 683 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 ASMTLO95671 621 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 CCNYL3P0C7X3 344 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 GZMAP12544 262 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 GARSP41250 739 aaKnown RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 NFATC2Q13469 925 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 FHL5Q5TD97 284 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 MARK2Q7KZI7 788 aaKnown RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 ZNF761Q86XN6 746 aaPredicted RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 RBM12BQ8IXT5 1001 aaKnown RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 TEX26Q8N6G2 289 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 AOPEPQ8N6M6 819 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 SCAMP4Q969E2 229 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 FATE1Q969F0 183 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 TRIM11Q96F44 468 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 STAMBPL1Q96FJ0 436 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 C9orf72Q96LT7 481 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 FCRL4Q96PJ5 515 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 SYT11Q9BT88 431 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 CARD9Q9H257 536 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 ZNF768Q9H5H4 540 aaKnown RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 MRPL47Q9HD33 250 aaKnown RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 APMAPQ9HDC9 416 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 RCOR3Q9P2K3 495 aaPredicted RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 CPNE7Q9UBL6 633 aa14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 PLEKHB1Q9UF11 243 aaPredicted RBP14.14□□□□□ -0.15
LYSMD3-202ENST00000453259 LRRC10BA6NIK2 292 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 AGFG2O95081 481 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 MYBL1P10243 752 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 XRCC1P18887 633 aaPredicted RBP14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 VARSP26640 1264 aaKnown RBP14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 EPHB1P54762 984 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 CHST15Q7LFX5 561 aaPredicted RBP14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 PRSS42Q7Z5A4 293 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 POLNQ7Z5Q5 900 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 BPHLQ86WA6 291 aaPredicted RBP14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 RIOK2Q9BVS4 552 aaKnown RBP14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 LIMA1Q9UHB6 759 aaKnown RBP14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 CD84Q9UIB8 345 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 CROTQ9UKG9 612 aa14.13□□□□□ -0.15
LYSMD3-202ENST00000453259 TTC24A2A3L6 582 aaPredicted RBP14.12□□□□□ -0.15
LYSMD3-202ENST00000453259 ENO4A6NNW6 628 aa14.12□□□□□ -0.15
LYSMD3-202ENST00000453259 NUAK1O60285 661 aa14.12□□□□□ -0.15
LYSMD3-202ENST00000453259 CREG1O75629 220 aa14.12□□□□□ -0.15
LYSMD3-202ENST00000453259 EML2O95834 649 aa14.12□□□□□ -0.15
LYSMD3-202ENST00000453259 KRT7P08729 469 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms