RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 HERPUD2Q9BSE4 406 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 MIR1-1HGQ9H1L0 117 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 RAB23Q9ULC3 237 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 TESMINQ9Y4I5 508 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 NPM3O75607 178 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 ERAL1O75616 437 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 TCF3P15923 654 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 MAGEA10P43363 369 aaPredicted RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 CLCQ05315 142 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 SLC25A52Q3SY17 297 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 RBM20Q5T481 1227 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 NEK10Q6ZWH5 1172 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 THAP5Q7Z6K1 395 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 NKAPQ8N5F7 415 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 HSFY1Q96LI6 401 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 MINDY3Q9H8M7 445 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 MRPL17Q9NRX2 175 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 OSER1Q9NX31 292 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 ARHGAP28Q9P2N2 729 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 IGKV6D-41A0A0C4DH26 115 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 CCL16O15467 120 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 DHX15O43143 795 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 AKAP14Q86UN6 197 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 GPR180Q86V85 440 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 LIX1Q8N485 282 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 TOP1MTQ969P6 601 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 CAMKK2Q96RR4 588 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 ADI1Q9BV57 179 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 SLC39A8Q9C0K1 460 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 PTGFRNQ9P2B2 879 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 RAB26Q9ULW5 256 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 FCF1Q9Y324 198 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 A0A1B0GVG6 124 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 A8MV72 311 aaPredicted RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 LRIG2O94898 1065 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 TBX18O95935 607 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 C9P02748 559 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 MMP3P08254 477 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 TALDO1P37837 337 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 USP39Q53GS9 565 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 SMYD5Q6GMV2 418 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 CHST15Q7LFX5 561 aaPredicted RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 PROX1Q92786 737 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 GTPBP3Q969Y2 492 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 NARS2Q96I59 477 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 FTHL17Q9BXU8 183 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 LHX5Q9H2C1 402 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 POLE4Q9NR33 117 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 AGO1Q9UL18 857 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 PCDHB9Q9Y5E1 797 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 PTPRJQ12913 1337 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 DIRAS1O95057 198 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 SLC25A14O95258 325 aaPredicted RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 ACTR3P61158 418 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 KLHL12Q53G59 568 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 PLD6Q8N2A8 252 aaKnown RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 HMX1Q9NP08 348 aaPredicted RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 FAM105AQ9NUU6 356 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 FKBPLQ9UIM3 349 aa7.72□□□□□ -1.17
RIF1-206ENST00000453091 COL1A1P02452 1464 aaPredicted RBP7.72□□□□□ -1.17
RIF1-206ENST00000453091 BCLAF3A2AJT9 711 aaKnown RBP7.71□□□□□ -1.17
RIF1-206ENST00000453091 CLTBP09497 229 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 MBTD1Q05BQ5 628 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 PRKG2Q13237 762 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 RAPSNQ13702 412 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 DPYSQ14117 519 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 GPAT3Q53EU6 434 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 COLEC12Q5KU26 742 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 NCBP2-AS2Q69YL0 99 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 ZNF410Q86VK4 478 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 DQX1Q8TE96 717 aaKnown RBP7.71□□□□□ -1.17
RIF1-206ENST00000453091 PEBP4Q96S96 227 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 C11orf16Q9NQ32 467 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 C3orf18Q9UK00 162 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 MKL2Q9ULH7 1088 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 FZD10Q9ULW2 581 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 BCKDKO14874 412 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 SNAP91O60641 907 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 CCNKO75909 580 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 AP2A2O94973 939 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 MYL12AP19105 171 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 IGFBP5P24593 272 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 KPNA1P52294 538 aaPredicted RBP7.71□□□□□ -1.17
RIF1-206ENST00000453091 GSCP56915 257 aaPredicted RBP7.71□□□□□ -1.17
RIF1-206ENST00000453091 TOP3AQ13472 1001 aaPredicted RBP7.71□□□□□ -1.17
RIF1-206ENST00000453091 PLPP4Q5VZY2 271 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 RETSATQ6NUM9 610 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 MACC1Q6ZN28 852 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 PTCHD4Q6ZW05 846 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 KRT78Q8N1N4 520 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 SCAMP5Q8TAC9 235 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 ZNF671Q8TAW3 534 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 RDH11Q8TC12 318 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 CD99L2Q8TCZ2 262 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 CLIP3Q96DZ5 547 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 IPPKQ9H8X2 491 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 TCAF1Q9Y4C2 921 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 PPP2R3BQ9Y5P8 575 aa7.71□□□□□ -1.17
RIF1-206ENST00000453091 KIF20BQ96Q89 1820 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms