RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 BRD8Q9H0E9 1235 aa10.73□□□□□ -0.69
SRRT-205ENST00000449389 RMI1Q9H9A7 625 aa10.73□□□□□ -0.69
SRRT-205ENST00000449389 NHEJ1Q9H9Q4 299 aaPredicted RBP10.73□□□□□ -0.69
SRRT-205ENST00000449389 SPTLC3Q9NUV7 552 aa10.73□□□□□ -0.69
SRRT-205ENST00000449389 WDR70Q9NW82 654 aa10.73□□□□□ -0.69
SRRT-205ENST00000449389 DDX56Q9NY93 547 aaKnown RBP10.73□□□□□ -0.69
SRRT-205ENST00000449389 KCNK4Q9NYG8 393 aa10.73□□□□□ -0.69
SRRT-205ENST00000449389 SEPT10Q9P0V9 454 aa10.73□□□□□ -0.69
SRRT-205ENST00000449389 ZNHIT2Q9UHR6 403 aa10.73□□□□□ -0.69
SRRT-205ENST00000449389 PIEZO2Q9H5I5 2752 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 IGHV1OR21-1A0A087WYE8 117 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 IGHV5-10-1A0A0J9YXX1 117 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 C3orf70A6NLC5 250 aaPredicted RBP10.72□□□□□ -0.69
SRRT-205ENST00000449389 AGRPO00253 132 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 PPM1DO15297 605 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 DNAJC6O75061 913 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 ATP1A1P05023 1023 aaKnown RBP10.72□□□□□ -0.69
SRRT-205ENST00000449389 SLC2A4P14672 509 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 SLC1A1P43005 524 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 FASLGP48023 281 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 LIMK2P53671 638 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 GPLD1P80108 840 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 TCEAL1Q15170 157 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 TGIF1Q15583 401 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 SLC14A2Q15849 920 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 ZNF574Q6ZN55 896 aaPredicted RBP10.72□□□□□ -0.69
SRRT-205ENST00000449389 NT5DC3Q86UY8 548 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 RFX6Q8HWS3 928 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 CNGA4Q8IV77 575 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 RHOT1Q8IXI2 618 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 SFRP1Q8N474 314 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 CCDC112Q8NEF3 446 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 OR4D9Q8NGE8 314 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 SLC37A2Q8TED4 501 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 USP7Q93009 1102 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 IMP4Q96G21 291 aaKnown RBP10.72□□□□□ -0.69
SRRT-205ENST00000449389 CCDC74BQ96LY2 380 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 OLFM3Q96PB7 478 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 TRIB3Q96RU7 358 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 WDR24Q96S15 920 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 CHP1Q99653 195 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 SLC25A51Q9H1U9 297 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 TSPY26PQ9H489 355 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 STN1Q9H668 368 aaKnown RBP10.72□□□□□ -0.69
SRRT-205ENST00000449389 RAD18Q9NS91 495 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 FOXJ2Q9P0K8 574 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 INTUQ9ULD6 942 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 CNOT6Q9ULM6 557 aaKnown RBP10.72□□□□□ -0.69
SRRT-205ENST00000449389 PCDHB11Q9Y5F2 797 aa10.72□□□□□ -0.69
SRRT-205ENST00000449389 OAS3Q9Y6K5 1087 aaKnown RBP10.72□□□□□ -0.69
SRRT-205ENST00000449389 FADS2P1A8MWK0 482 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 C9orf172C9J069 976 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 THRAP10827 490 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 DCDC1P59894 354 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 CDK18Q07002 472 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 GALNT3Q14435 633 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 ZNF569Q5MCW4 686 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 NKAIN2Q5VXU1 208 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 KIAA1614Q5VZ46 1190 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 NPNTQ6UXI9 565 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 BZW1Q7L1Q6 419 aaKnown RBP10.71□□□□□ -0.69
SRRT-205ENST00000449389 CHST15Q7LFX5 561 aaPredicted RBP10.71□□□□□ -0.69
SRRT-205ENST00000449389 LYSMD3Q7Z3D4 306 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 ZFAND4Q86XD8 727 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 AGBL5Q8NDL9 886 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 RCBTB1Q8NDN9 531 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 OR10G6Q8NH81 332 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 SH3KBP1Q96B97 665 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 RNF25Q96BH1 459 aaPredicted RBP10.71□□□□□ -0.69
SRRT-205ENST00000449389 AGAP3Q96P47 875 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 SRPK1Q96SB4 655 aaKnown RBP10.71□□□□□ -0.69
SRRT-205ENST00000449389 SLC38A3Q99624 504 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 HERPUD2Q9BSE4 406 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 ZSCAN5AQ9BUG6 496 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 CEP41Q9BYV8 373 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 ZMYND15Q9H091 742 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 CARD9Q9H257 536 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 ZFYVE1Q9HBF4 777 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 MAGEE1Q9HCI5 957 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 SARS2Q9NP81 518 aaKnown RBP10.71□□□□□ -0.69
SRRT-205ENST00000449389 NFKBIL1Q9UBC1 381 aaPredicted RBP10.71□□□□□ -0.69
SRRT-205ENST00000449389 PCDHGA3Q9Y5H0 932 aa10.71□□□□□ -0.69
SRRT-205ENST00000449389 COL6A6A6NMZ7 2263 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 SCN8AQ9UQD0 1980 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 TRBV23OR9-2A0A075B6M9 112 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 GPR89AB7ZAQ6 455 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.7□□□□□ -0.7
SRRT-205ENST00000449389 AKR1B15C9JRZ8 316 aaPredicted RBP10.7□□□□□ -0.7
SRRT-205ENST00000449389 EFSO43281 561 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 SPOPO43791 374 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 DUX1O43812 170 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 NUAK1O60285 661 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 GPR89BP0CG08 455 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 CCL4P13236 92 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 ACP5P13686 325 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 CSF2RBP32927 897 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 CSTF2P33240 577 aaKnown RBP eCLIP10.7□□□□□ -0.7
SRRT-205ENST00000449389 NR2C2P49116 596 aa10.7□□□□□ -0.7
SRRT-205ENST00000449389 PPM1FP49593 454 aaPredicted RBP10.7□□□□□ -0.7
SRRT-205ENST00000449389 DYNLT1P63172 113 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms