RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 LRCH3Q96II8 777 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 ACBD6Q9BR61 282 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 ZNF670Q9BS34 389 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 NAT9Q9BTE0 207 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 TTYH1Q9H313 450 aaPredicted RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 LRRC40Q9H9A6 602 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 PRDM16Q9HAZ2 1276 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 FBRSL1Q9HCM7 1045 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 TUBA8Q9NY65 449 aaPredicted RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 IFT80Q9P2H3 777 aaPredicted RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 MID2Q9UJV3 735 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 CPQQ9Y646 472 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 MKI67P46013 3256 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 ZNF701M0R085 212 aaPredicted RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 PSMD11O00231 422 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 GRM6O15303 877 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 MFSD11O43934 449 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 NRP2O60462 931 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 DLX3O60479 287 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 CLASP2O75122 1294 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 SNRPB2P08579 225 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 INHBBP09529 407 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 MTHFD1P11586 935 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 S100A1P23297 94 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 MYF6P23409 242 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 ALDH4A1P30038 563 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 OXTRP30559 389 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 GSSP48637 474 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 NDUFV1P49821 464 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 NDST1P52848 882 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 PIGFQ07326 219 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 INPP5AQ14642 412 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 FUT11Q495W5 492 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 VARS2Q5ST30 1063 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 OVOS1Q6IE37 1185 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 KIAA1841Q6NSI8 718 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 PMF1Q6P1K2 205 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 C4orf22Q6V702 233 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 PRR23BQ6ZRT6 265 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 ZNF354CQ86Y25 554 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 TP53INP2Q8IXH6 220 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 CPSF7Q8N684 471 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 MRPL43Q8N983 215 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 FAM149B1Q96BN6 582 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 ITPKCQ96DU7 683 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 NSMCE3Q96MG7 304 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 CSPG4P5Q96PW8 444 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 NOL6Q9H6R4 1146 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 TMPRSS4Q9NRS4 437 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 CACNG4Q9UBN1 327 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 SEPT3Q9UH03 358 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 PTBP2Q9UKA9 531 aaKnown RBP8.1□□□□□ -1.11
LINC00954-202ENST00000449086 NME7Q9Y5B8 376 aa8.1□□□□□ -1.11
LINC00954-202ENST00000449086 TCRBV3S1A0A5B6 114 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TRPC5OSA6NMA1 111 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 F8W810 466 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 SLCO1B7G3V0H7 640 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 SDHDO14521 159 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TIMM44O43615 452 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 XYLBO75191 536 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 H2AFYO75367 372 aaKnown RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 LCP1P13796 627 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 NCK1P16333 377 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TKTP29401 623 aaKnown RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 POLR2IP36954 125 aaKnown RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 STX1BP61266 288 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 CTBP1Q13363 440 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 RFTN1Q14699 578 aaPredicted RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 MAPRE2Q15555 327 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 MAPRE1Q15691 268 aaKnown RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 PSMD5Q16401 504 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 IMPG1Q17R60 797 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 GOLGA7BQ2TAP0 167 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 C6orf10Q5SRN2 563 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 DEPDC1Q5TB30 811 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 ZYG11AQ6WRX3 759 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 DSG4Q86SJ6 1040 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 KIAA2013Q8IYS2 634 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 LSMEM2Q8N112 164 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 CCDC185Q8N715 623 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 PCYOX1LQ8NBM8 494 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 CLEC4CQ8WTT0 213 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 HDAC10Q969S8 669 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 NXNL1Q96CM4 212 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 QKIQ96PU8 341 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TCF25Q9BQ70 676 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 C9orf16Q9BUW7 83 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 POMKQ9H5K3 350 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 ENTPD7Q9NQZ7 604 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 RIC8BQ9NVN3 520 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 DPP7Q9UHL4 492 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 CDH9Q9ULB4 789 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 CLDN25C9JDP6 229 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 PTGES3LE9PB15 166 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 DLGAP1O14490 977 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 PFDN6O15212 129 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 SYNCRIPO60506 623 aaKnown RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 PAPLNO95428 1278 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 ALBP02768 609 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms