RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 PCCBP05166 539 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PRPS2P11908 318 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 GRIA4P48058 902 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ACAP2Q15057 778 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 EARS2Q5JPH6 523 aaKnown RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CCNYL2Q5T2Q4 361 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CXXC5Q7LFL8 322 aaKnown RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 DQX1Q8TE96 717 aaKnown RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CLEC4DQ8WXI8 215 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 RAD9AQ99638 391 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 TAPBPLQ9BX59 468 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 ELAC1Q9H777 363 aaKnown RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 PALMDQ9NP74 551 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CRNNQ9UBG3 495 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 B4GALT5O43286 388 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 KERAO60938 352 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SIN3BO75182 1162 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CYB5AP00167 134 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 FAM189A2Q15884 450 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 DGUOKQ16854 277 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SPANXN2Q5MJ10 180 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 KLHL24Q6TFL4 600 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 XYLT1Q86Y38 959 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 GLB1L3Q8NCI6 653 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 RAB7BQ96AH8 199 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 KIAA1143Q96AT1 154 aaPredicted RBP8.51□□□□□ -1.05
PTPN3-204ENST00000446349 LRIG1Q96JA1 1093 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 GINS4Q9BRT9 223 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 SLC4A5Q9BY07 1137 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 CLDND1Q9NY35 253 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 GMEB2Q9UKD1 530 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 RAB21Q9UL25 225 aa8.51□□□□□ -1.05
PTPN3-204ENST00000446349 A0A0U1RQF3 1178 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 KLRC4O43908 158 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SOX30O94993 753 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 KLK3P07288 261 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 LYNP07948 512 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 GNPDA1P46926 289 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 UGCGQ16739 394 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 PDSS1Q5T2R2 415 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 C12orf29Q8N999 325 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ANKLE1Q8NAG6 615 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 PCED1BQ96HM7 432 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 PSKH2Q96QS6 385 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SFXN1Q9H9B4 322 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 HAO1Q9UJM8 370 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 L1RE1Q9UN81 338 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 RUVBL1Q9Y265 456 aaKnown RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 FAM234BA2RU67 622 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SOWAHBA6NEL2 793 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 H0Y858 1186 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ENDOUP21128 410 aaKnown RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CASP5P51878 434 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 C9orf64Q5T6V5 341 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 C8orf59Q8N0T1 100 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MREGQ8N565 214 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CLEC4MQ9H2X3 399 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SRMSQ9H3Y6 488 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ERGIC3Q9Y282 383 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 VIRMAQ69YN4 1812 aaKnown RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 A8MX80 341 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 WFS1O76024 890 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 IL12BP29460 328 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CARD16Q5EG05 197 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MTX3Q5HYI7 312 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ADGRF1Q5T601 910 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 FAM171BQ6P995 826 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ZC3H7AQ8IWR0 971 aaKnown RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 OR6Y1Q8NGX8 325 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 NSMCE3Q96MG7 304 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 AARSD1Q9BTE6 412 aaKnown RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 HDHD2Q9H0R4 259 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 TTLL8A6PVC2 850 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 FCHO1O14526 889 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SUV39H1O43463 412 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CHST10O43529 356 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MPZL2O60487 215 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CLPTM1O96005 669 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 GALNT3Q14435 633 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ZC3H14Q6PJT7 736 aaKnown RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CHST15Q7LFX5 561 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 STK32CQ86UX6 486 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 RANBP3LQ86VV4 465 aaPredicted RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CCDC103Q8IW40 242 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 OR4A15Q8NGL6 344 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ARHGEF3Q9NR81 526 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SERINC1Q9NRX5 453 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 NDRG2Q9UN36 371 aaKnown RBP8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SCML2Q9UQR0 700 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 DUXAA6NLW8 204 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CLOCKO15516 846 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 SLC7A4O43246 635 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 MYL9P24844 172 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 DNAJB1P25685 340 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 HCAR3P49019 387 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 DAOAP59103 153 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 ZCCHC12Q6PEW1 402 aa8.5□□□□□ -1.05
PTPN3-204ENST00000446349 CCDC80Q76M96 950 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms