RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ADORA2A-AS1P86434 159 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 OLIG2Q13516 323 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 GRAPQ13588 217 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 NFE2L1Q14494 772 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 FGFBP1Q14512 234 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 IL11RAQ14626 422 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 VEPH1Q14D04 833 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 HSPB2Q16082 182 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 DNAJC21Q5F1R6 531 aaKnown RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 CST9LP1Q5W188 147 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 ALKBH5Q6P6C2 394 aaKnown RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 ERC1Q8IUD2 1116 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 HSCBQ8IWL3 235 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 CCAR2Q8N163 923 aaKnown RBP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 SGCDQ92629 289 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 PTP4A1Q93096 173 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 ZNF622Q969S3 477 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 APOLD1Q96LR9 279 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 CFAP57Q96MR6 1250 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 OR2A14Q96R47 310 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 PI4K2AQ9BTU6 479 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 HRH4Q9H3N8 390 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 PDZD7Q9H5P4 517 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 SETD4Q9NVD3 440 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 ADPRHL2Q9NX46 363 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 ARHGEF38Q9NXL2 777 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 ANKRD10Q9NXR5 420 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 PLK2Q9NYY3 685 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 AMACRQ9UHK6 382 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 TUBE1Q9UJT0 475 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 OSGIN1Q9UJX0 560 aa4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P48-201ENST00000446155 EIF4G1Q04637 1599 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 FAM90A10PA6NDY2 464 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 A6NL46 340 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 H3BNX3 289 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 TNFRSF13BO14836 293 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 IPO8O15397 1037 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 SPRY3O43610 288 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 KLK8O60259 260 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 AVILO75366 819 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 SLC25A12O75746 678 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 RECQL5O94762 991 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CRYABP02511 175 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 FYNP06241 537 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 HOXB5P09067 269 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 SLC2A4P14672 509 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 ITGAXP20702 1163 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 HOXC8P31273 242 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 ARRB2P32121 409 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CCR10P46092 362 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 NPY4RP50391 375 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 GPS2Q13227 327 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 GPR18Q14330 331 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 PPP2R5BQ15173 497 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 HIST2H2ACQ16777 129 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 IGSF11Q5DX21 431 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 MPP7Q5T2T1 576 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 KRT79Q5XKE5 535 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CNSTQ6PJW8 725 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CFAP77Q6ZQR2 320 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 RBPMS2Q6ZRY4 209 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 C9orf47Q6ZRZ4 202 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 ZNF367Q7RTV3 350 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 PATL1Q86TB9 770 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 XXYLT1Q8NBI6 393 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 NEXN-AS1Q8NBZ9 246 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 GPT2Q8TD30 523 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 ARHGEF26Q96DR7 871 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 PABPC5Q96DU9 382 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 IFIH1Q9BYX4 1025 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 FAM129AQ9BZQ8 928 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CDT1Q9H211 546 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 PLEKHA4Q9H4M7 779 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CATSPERBQ9H7T0 1116 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 RANGRFQ9HD47 186 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 PSD3Q9NYI0 1048 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CTNNAL1Q9UBT7 734 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 CNOT8Q9UFF9 292 aaKnown RBP4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 NDRG3Q9UGV2 375 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 ODF2LQ9ULJ1 636 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 SQORQ9Y6N5 450 aa4.5□□□□□ -1.69
HMGB1P48-201ENST00000446155 ZNF644Q9H582 1327 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 TRIP12Q14669 1992 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 LOC102723996A0A087X1L8 192 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 ARHGEF37A1IGU5 675 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CLEC18AA5D8T8 446 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 CD8B2A6NJW9 211 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 INAFM1C9JVW0 142 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 KLRF2D3W0D1 207 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 MS4A18H0YCH9 400 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 DDX39AO00148 427 aaKnown RBP4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 PSMD14O00487 310 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 STX6O43752 255 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 SLC22A3O75751 556 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 NKX2-2O95096 273 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 OAZ2O95190 189 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 TPOP07202 933 aa4.49□□□□□ -1.69
HMGB1P48-201ENST00000446155 MC5RP33032 325 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms