RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 ANKRD20A1Q5TYW2 823 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 ANKRD20A3Q5VUR7 823 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 RBM44Q6ZP01 1051 aaKnown RBP14.64□□□□□ -0.07
USE1-202ENST00000445667 CDKL3Q8IVW4 592 aaPredicted RBP14.64□□□□□ -0.07
USE1-202ENST00000445667 OR6C4Q8NGE1 309 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 PATE1Q8WXA2 126 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 ATXN7L3BQ96GX2 97 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 OR2M4Q96R27 311 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 GORASP1Q9BQQ3 440 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 LRIT1Q9P2V4 623 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 GUCA1BQ9UMX6 200 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 ENTPD2Q9Y5L3 495 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 KNTC1P50748 2209 aa14.64□□□□□ -0.07
USE1-202ENST00000445667 A0A1W2PQM1 296 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 NTN3O00634 580 aaPredicted RBP14.63□□□□□ -0.07
USE1-202ENST00000445667 BRINP1O60477 761 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 ECEL1O95672 775 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 AGTP01019 485 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 EPOP01588 193 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 PTMAP06454 111 aaKnown RBP14.63□□□□□ -0.07
USE1-202ENST00000445667 TNNT3P45378 269 aaPredicted RBP14.63□□□□□ -0.07
USE1-202ENST00000445667 GEMP55040 296 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 OLIG2Q13516 323 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 CHST15Q7LFX5 561 aaPredicted RBP14.63□□□□□ -0.07
USE1-202ENST00000445667 GALNT13Q8IUC8 556 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 TTC30BQ8N4P2 665 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 RNF10Q8N5U6 811 aaKnown RBP14.63□□□□□ -0.07
USE1-202ENST00000445667 WDR48Q8TAF3 677 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 CCDC110Q8TBZ0 833 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 HES6Q96HZ4 224 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 FERMT1Q9BQL6 677 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 FICDQ9BVA6 458 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 CDH19Q9H159 772 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 GBA3Q9H227 469 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 LRRN3Q9H3W5 708 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 RAD18Q9NS91 495 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 VPS18Q9P253 973 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 ZZEF1O43149 2961 aa14.63□□□□□ -0.07
USE1-202ENST00000445667 TRBV23OR9-2A0A075B6M9 112 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 A0A1W2PNU3 283 aaPredicted RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 TCRBV7S2A1N4TA0A589 114 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 TLX3O43711 291 aaPredicted RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 TCEA3O75764 348 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 SLC25A14O95258 325 aaPredicted RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 RPLP0P05388 317 aaKnown RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 PSMB4P28070 264 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 RP1P56715 2156 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 DCDC1P59894 354 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 GABREP78334 506 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 ZNF569Q5MCW4 686 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 ITPRIPL1Q6GPH6 555 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 C19orf48Q6RUI8 117 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 C17orf82Q86X59 251 aaPredicted RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 CCNJLQ8IV13 435 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 NAGSQ8N159 534 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 ARL14Q8N4G2 192 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 TRAM1L1Q8N609 369 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 BLOC1S5Q8TDH9 187 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 DCBLD2Q96PD2 775 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 GFM1Q96RP9 751 aaKnown RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 SRPK1Q96SB4 655 aaKnown RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 ZSCAN5AQ9BUG6 496 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 FSD1LQ9BXM9 530 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 OR2AG1Q9H205 316 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 ATXN10Q9UBB4 475 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 APPL1Q9UKG1 709 aa14.62□□□□□ -0.07
USE1-202ENST00000445667 ATXN7L1Q9ULK2 861 aaPredicted RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 R3HDM2Q9Y2K5 976 aaKnown RBP14.62□□□□□ -0.07
USE1-202ENST00000445667 COL27A1Q8IZC6 1860 aaPredicted RBP14.61□□□□□ -0.07
USE1-202ENST00000445667 GOLGA6L9A6NEM1 432 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 ARHGAP6O43182 974 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 B4GAT1O43505 415 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 KRT86O43790 486 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 NUDT21O43809 227 aaKnown RBP14.61□□□□□ -0.07
USE1-202ENST00000445667 MTX2O75431 263 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 ANXA9O76027 345 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 STK10O94804 968 aaKnown RBP14.61□□□□□ -0.07
USE1-202ENST00000445667 ZNF8P17098 575 aaPredicted RBP14.61□□□□□ -0.07
USE1-202ENST00000445667 HLA-DPA1P20036 260 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 HMGCLP35914 325 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 PDX1P52945 283 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 B4GALNT1Q00973 533 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 C3orf38Q5JPI3 329 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 FOXR1Q6PIV2 292 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 GLT6D1Q7Z4J2 308 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 SPRED1Q7Z699 444 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 B3GNT8Q7Z7M8 397 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 HNRNPLLQ8WVV9 542 aaKnown RBP14.61□□□□□ -0.07
USE1-202ENST00000445667 GLYATL1Q969I3 302 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 APOL2Q9BQE5 337 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 FOXP3Q9BZS1 431 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 TSGA10Q9BZW7 698 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 CARD9Q9H257 536 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 TRABDQ9H4I3 376 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 POLR1BQ9H9Y6 1135 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 TRIM39Q9HCM9 518 aa14.61□□□□□ -0.07
USE1-202ENST00000445667 NFKBIL1Q9UBC1 381 aaPredicted RBP14.61□□□□□ -0.07
USE1-202ENST00000445667 RALYQ9UKM9 306 aaKnown RBP14.61□□□□□ -0.07
USE1-202ENST00000445667 TMPRSS11EQ9UL52 423 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms