RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 RHDQ02161 417 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 SPIDRQ14159 915 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 LY6DQ14210 128 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 NOMO1Q15155 1222 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 TCEA2Q15560 299 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 TBC1D25Q3MII6 688 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 SEL1L2Q5TEA6 688 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 PDPK2PQ6A1A2 396 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 RBM44Q6ZP01 1051 aaKnown RBP11.02□□□□□ -0.65
HLA-F-221ENST00000444621 LSMEM2Q8N112 164 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 ZNF567Q8N184 647 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 SPATA22Q8NHS9 363 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 ANP32BQ92688 251 aaKnown RBP11.02□□□□□ -0.65
HLA-F-221ENST00000444621 SCAMP4Q969E2 229 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 WBP1Q96G27 269 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 PDXPQ96GD0 296 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 NAF1Q96HR8 494 aaKnown RBP11.02□□□□□ -0.65
HLA-F-221ENST00000444621 ZSCAN5AQ9BUG6 496 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 FRMD8Q9BZ67 464 aaPredicted RBP11.02□□□□□ -0.65
HLA-F-221ENST00000444621 TMEM168Q9H0V1 697 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 SYNDIG1Q9H7V2 258 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 FGF22Q9HCT0 170 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 UBP1Q9NZI7 540 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 SUFUQ9UMX1 484 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
HLA-F-221ENST00000444621 PKP3Q9Y446 797 aa11.02□□□□□ -0.65
HLA-F-221ENST00000444621 RHPN2P1A8MT19 583 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 B4DGG1 531 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 INPP4BO15327 924 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 KCNN4O15554 427 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 SLC25A14O95258 325 aaPredicted RBP11.01□□□□□ -0.65
HLA-F-221ENST00000444621 SLC4A1P02730 911 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 CEACAM5P06731 702 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 CCDC175P0C221 793 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 PYGMP11217 842 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 MYF5P13349 255 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 SLC2A4P14672 509 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 GLB1P16278 677 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 RBL1P28749 1068 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 PPM1FP49593 454 aaPredicted RBP11.01□□□□□ -0.65
HLA-F-221ENST00000444621 WNT3AP56704 352 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 WASHC5Q12768 1159 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 LRP8Q14114 963 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 ZNF569Q5MCW4 686 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 ARHGAP40Q5TG30 622 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 GUSBP11Q6P575 273 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 LYSMD3Q7Z3D4 306 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 TMEM139Q8IV31 216 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 SLC35F3Q8IY50 421 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 SLC25A41Q8N5S1 370 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 DCBLD1Q8N8Z6 715 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 LRRC57Q8N9N7 239 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 IPMKQ8NFU5 416 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 GPBAR1Q8TDU6 330 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 TTC25Q96NG3 672 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 GFM1Q96RP9 751 aaKnown RBP11.01□□□□□ -0.65
HLA-F-221ENST00000444621 CCDC3Q9BQI4 270 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 STRADBQ9C0K7 418 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 STN1Q9H668 368 aaKnown RBP11.01□□□□□ -0.65
HLA-F-221ENST00000444621 CPNE5Q9HCH3 593 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 VPS18Q9P253 973 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 SHOC2Q9UQ13 582 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 SLC17A4Q9Y2C5 497 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 ZNF711Q9Y462 761 aa11.01□□□□□ -0.65
HLA-F-221ENST00000444621 COL12A1Q99715 3063 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 C2orf81A6NN90 581 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 GPR89AB7ZAQ6 455 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 PSMD3O43242 534 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 SLC28A2O43868 658 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 PPFIA2O75334 1257 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 CSO75390 466 aaKnown RBP11□□□□□ -0.65
HLA-F-221ENST00000444621 FTCDO95954 541 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 FGF1P05230 155 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 GPR89BP0CG08 455 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 PNLIPP16233 465 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ADCY8P40145 1251 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ACTR1BP42025 376 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 POLD2P49005 469 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 TMPRSS3P57727 454 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ACTR1AP61163 376 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 PDE1BQ01064 536 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 SRSF1Q07955 248 aaKnown RBP eCLIP11□□□□□ -0.65
HLA-F-221ENST00000444621 ADCY2Q08462 1091 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 GTF2H3Q13889 308 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 PTPRRQ15256 657 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 C14orf28Q4W4Y0 310 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ANKRD20A2Q5SQ80 823 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ANKRD20A1Q5TYW2 823 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ANKRD20A3Q5VUR7 823 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 OGFOD3Q6PK18 319 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ARHGEF18Q6ZSZ5 1173 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 MARK2Q7KZI7 788 aaKnown RBP11□□□□□ -0.65
HLA-F-221ENST00000444621 TMC3Q7Z5M5 1100 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 TRAM1L1Q8N609 369 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 KYQ8NBH2 561 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 GDAP1Q8TB36 358 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 ZDHHC1Q8WTX9 485 aa11□□□□□ -0.65
HLA-F-221ENST00000444621 TADA1Q96BN2 335 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms