RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 INPP4BO15327 924 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 ZW10O43264 779 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 DNAJC6O75061 913 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 MPOP05164 745 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 RPLP0P05388 317 aaKnown RBP18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 AK4P27144 223 aaPredicted RBP18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 PDX1P52945 283 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 EIF3IQ13347 325 aaKnown RBP18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 NR1D2Q14995 579 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 CLPPQ16740 277 aaPredicted RBP18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 FAM182AQ5T1J6 154 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 ZDHHC20Q5W0Z9 365 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 SLC30A9Q6PML9 568 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 PEX26Q7Z412 305 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 SPRED1Q7Z699 444 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 TRIM74Q86UV6 250 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 CCNJLQ8IV13 435 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 TRAM1L1Q8N609 369 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 GPR26Q8NDV2 337 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 ATXN7L3BQ96GX2 97 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 PLEKHG4BQ96PX9 1271 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 UBP1Q9NZI7 540 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 HACD3Q9P035 362 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 RNF215Q9Y6U7 377 aa18.68■□□□□ 0.58
ATPAF2-201ENST00000444058 DSPP15924 2871 aaKnown RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 CELSR3Q9NYQ7 3312 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 H7C0C1 242 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 RRP8O43159 456 aaKnown RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 TLX3O43711 291 aaPredicted RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 ASMTLO95671 621 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 PIRTP0C851 137 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 PYGMP11217 842 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 HLA-DPA1P20036 260 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 RBL1P28749 1068 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 CCKBRP32239 447 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 ACTR1BP42025 376 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 ATP5OP48047 213 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 ACTR1AP61163 376 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 CCL7P80098 99 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 OTUD4Q01804 1114 aaKnown RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 ITPRIPL1Q6GPH6 555 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 CDKL3Q8IVW4 592 aaPredicted RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 SFTPA2Q8IWL1 248 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 NAGSQ8N159 534 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 ARL14Q8N4G2 192 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 RNF10Q8N5U6 811 aaKnown RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 UBL4BQ8N7F7 174 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 SPC24Q8NBT2 197 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 WDR36Q8NI36 951 aaKnown RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 LIN37Q96GY3 246 aaPredicted RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 OXNAD1Q96HP4 312 aaPredicted RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 MRGPRX2Q96LB1 330 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 TMEM74Q96NL1 305 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 HERPUD2Q9BSE4 406 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 SPATA16Q9BXB7 569 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 CARD9Q9H257 536 aa18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 SUDS3Q9H7L9 328 aaPredicted RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 OAS3Q9Y6K5 1087 aaKnown RBP18.67■□□□□ 0.58
ATPAF2-201ENST00000444058 CCDC187A0A096LP49 1063 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 MACROD2A1Z1Q3 448 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 NUAK1O60285 661 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 ANXA9O76027 345 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 ECEL1O95672 775 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 ATP1A1P05023 1023 aaKnown RBP18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 RBP3P10745 1247 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 GPR3P46089 330 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 GSDMDP57764 484 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 SLC1A5Q15758 541 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 SIRPB2Q5JXA9 342 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 ZNF569Q5MCW4 686 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 MARK2Q7KZI7 788 aaKnown RBP18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 SLC46A1Q96NT5 459 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 PPP1R2P1Q96PQ5 205 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 GBA3Q9H227 469 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 TRIM39Q9HCM9 518 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 ASCL3Q9NQ33 180 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 THSD1Q9NS62 852 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 RSPH14Q9UHP6 348 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 ZNHIT2Q9UHR6 403 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 LHX6Q9UPM6 363 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 SATB2Q9UPW6 733 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 SPO11Q9Y5K1 396 aa18.66■□□□□ 0.58
ATPAF2-201ENST00000444058 ARHGEF17Q96PE2 2063 aaPredicted RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 LAMA5O15230 3695 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 A0A1W2PNU3 283 aaPredicted RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 CASC3O15234 703 aaKnown RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 STK10O94804 968 aaKnown RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 SLC25A14O95258 325 aaPredicted RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 BPIP17213 487 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 RBMS1P29558 406 aaKnown RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 EIF3EP60228 445 aaKnown RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 B4GALNT1Q00973 533 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 C3orf38Q5JPI3 329 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 LRRC69Q6ZNQ3 347 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 Q8N9G6 341 aaPredicted RBP18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 TTC13Q8NBP0 860 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 GLYATL1Q969I3 302 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 TMEM159Q96B96 161 aa18.65■□□□□ 0.58
ATPAF2-201ENST00000444058 VPS35Q96QK1 796 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms