RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PACSIN1Q9BY11 444 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 FAM83DQ9H4H8 585 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 RMI1Q9H9A7 625 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 RAD18Q9NS91 495 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 DTLQ9NZJ0 730 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 FOXJ2Q9P0K8 574 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 PLEKHM1Q9Y4G2 1056 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 HEMK1Q9Y5R4 338 aaPredicted RBP11.69□□□□□ -0.54
TTC28-203ENST00000442232 ATMQ13315 3056 aa11.69□□□□□ -0.54
TTC28-203ENST00000442232 CFAP46Q8IYW2 2715 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 IGHV1OR21-1A0A087WYE8 117 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SSU72P8A0A1W2PR75 194 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 C9orf172C9J069 976 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 J3QKU1 62 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 KCNK1O00180 336 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 MTA2O94776 668 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SLC4A1P02730 911 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 ATP1A1P05023 1023 aaKnown RBP11.68□□□□□ -0.54
TTC28-203ENST00000442232 ITGB2P05107 769 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 CD1CP29017 333 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 ARHGAP25P42331 645 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 NOP2P46087 812 aaKnown RBP11.68□□□□□ -0.54
TTC28-203ENST00000442232 FASLGP48023 281 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SPINT3P49223 89 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 IFI35P80217 286 aaPredicted RBP11.68□□□□□ -0.54
TTC28-203ENST00000442232 HHEXQ03014 270 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 PPIDQ08752 370 aaKnown RBP11.68□□□□□ -0.54
TTC28-203ENST00000442232 NIPAL4Q0D2K0 466 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 PDK1Q15118 436 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 HENMT1Q5T8I9 393 aaKnown RBP11.68□□□□□ -0.54
TTC28-203ENST00000442232 NKAIN2Q5VXU1 208 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 CCDC70Q6NSX1 233 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 XKR5Q6UX68 686 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SLC9B2Q86UD5 537 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 VASH2Q86V25 355 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 VSIG1Q86XK7 387 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 CPNE8Q86YQ8 564 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 RFX6Q8HWS3 928 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 PQLC3Q8N755 202 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 ARRDC2Q8TBH0 407 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SLC37A2Q8TED4 501 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 CCDC42Q96M95 316 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 RNF157Q96PX1 679 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SMIM14Q96QK8 99 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 AGAP2Q99490 1192 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 HERPUD2Q9BSE4 406 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SPATA16Q9BXB7 569 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.68□□□□□ -0.54
TTC28-203ENST00000442232 FAM117AQ9C073 453 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 NENFQ9UMX5 172 aa11.68□□□□□ -0.54
TTC28-203ENST00000442232 SDK2Q58EX2 2172 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 TRBV23OR9-2A0A075B6M9 112 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 EFCAB7A8K855 629 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ANKRD66B4E2M5 251 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 B8ZZF3 427 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 PPM1DO15297 605 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 SNX2O60749 519 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 PRLP01236 227 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 THRAP10827 490 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 SFTPCP11686 197 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 CCL4P13236 92 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ACP5P13686 325 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 MAPK9P45984 424 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 RAB15P59190 212 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ZBTB17Q13105 803 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 GALNT3Q14435 633 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 QPCTQ16769 361 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 SNAP47Q5SQN1 464 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 DCAF12Q5T6F0 453 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 TMEM71Q6P5X7 295 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 LYSMD3Q7Z3D4 306 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 SFRP1Q8N474 314 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 IL22RA1Q8N6P7 574 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 RAPGEF5Q92565 580 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ART4Q93070 314 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ZSCAN5AQ9BUG6 496 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ASPSCR1Q9BZE9 553 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 GPR63Q9BZJ6 419 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 BRD8Q9H0E9 1235 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 OSGEPL1Q9H4B0 414 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 ZFYVE1Q9HBF4 777 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 SLC39A1Q9NY26 324 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 DDX56Q9NY93 547 aaKnown RBP11.67□□□□□ -0.54
TTC28-203ENST00000442232 KCNK6Q9Y257 313 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 PRKAB1Q9Y478 270 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
TTC28-203ENST00000442232 KIR2DS5A0A0G2JLQ3 304 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 A0A0G2JNG1 304 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 OR5K4A6NMS3 321 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.66□□□□□ -0.54
TTC28-203ENST00000442232 KIR2DS3K7RE56 304 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 GRID2O43424 1007 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 DNAJC6O75061 913 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 TNNT1P13805 278 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 MPSTP25325 297 aa11.66□□□□□ -0.54
TTC28-203ENST00000442232 CSF2RBP32927 897 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms