RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 SCG3Q8WXD2 468 aaKnown RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 ASB12Q8WXK4 309 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 ART4Q93070 314 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 FAM131CQ96AQ9 280 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 DTD2Q96FN9 168 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 DCUN1D1Q96GG9 259 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 HSPA12BQ96MM6 686 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 RUFY1Q96T51 708 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 EBNA1BP2Q99848 306 aaKnown RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 GORASP1Q9BQQ3 440 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 CCDC77Q9BR77 488 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 SPATA16Q9BXB7 569 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 MIR1-1HGQ9H1L0 117 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 SLC6A17Q9H1V8 727 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 KCNH6Q9H252 994 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 CCDC68Q9H2F9 335 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 ACBD3Q9H3P7 528 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 FAM83DQ9H4H8 585 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 WDR26Q9H7D7 661 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 VPS37BQ9H9H4 285 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 PPANQ9NQ55 473 aaKnown RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 RRAGDQ9NQL2 400 aaPredicted RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 GDF3Q9NR23 364 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 AASDHPPTQ9NRN7 309 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 TPSG1Q9NRR2 321 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 PHPT1Q9NRX4 125 aaPredicted RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 CATSPERZQ9NTU4 200 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 C20orf96Q9NUD7 363 aaPredicted RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 PIH1D1Q9NWS0 290 aaKnown RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 SYBUQ9NX95 663 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 WSB2Q9NYS7 404 aaPredicted RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 GRHL1Q9NZI5 618 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 ZFATQ9P243 1243 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 NFKBIL1Q9UBC1 381 aaPredicted RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 SERGEFQ9UGK8 458 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 DMGDHQ9UI17 866 aaKnown RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 GMEB2Q9UKD1 530 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 NFU1Q9UMS0 254 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 SOX13Q9UN79 622 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 ITM2BQ9Y287 266 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 PPIL1Q9Y3C6 166 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 IKBKGQ9Y6K9 419 aa4.96□□□□□ -1.62
CCDC140-202ENST00000440903 V9GYY5 206 aaPredicted RBP4.96□□□□□ -1.62
CCDC140-202ENST00000440903 A0A087WUV0 522 aaPredicted RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 KRTAP4-8A0A0G2JLE6 195 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 TCRBV7S3A2A0A539 114 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 CCDC78A2IDD5 438 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 E7ESA3 106 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 MMP20O60882 483 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 CLDN7O95471 211 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ASMTLO95671 621 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 PRLP01236 227 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 C1SP09871 688 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 SP9P0CG40 484 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 TPH1P17752 444 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 VCLP18206 1134 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 MSH3P20585 1137 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 OGNP20774 298 aaKnown RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 LHCGRP22888 699 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 CD27P26842 260 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 TEAD1P28347 426 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 MAT2AP31153 395 aaKnown RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ACSL1P33121 698 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 HOXD12P35452 270 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ETV3P41162 512 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ELK3P41970 407 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 GRIA1P42261 906 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 MAGEA3P43357 314 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 MAGEA4P43358 317 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 RABIFP47224 123 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 SPINT3P49223 89 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 CARSP49589 748 aaKnown RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 TTPAP49638 278 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ZNF140P52738 457 aaPredicted RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 METAP1P53582 386 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 TMPRSS15P98073 1019 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 CACNG1Q06432 222 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 IFFO1Q0D2I5 559 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 OVGP1Q12889 678 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 RALGDSQ12967 914 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 NAB1Q13506 487 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 OLIG2Q13516 323 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 PEX6Q13608 980 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 UBAP2LQ14157 1087 aaKnown RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 SIM2Q14190 667 aaPredicted RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 CRYMQ14894 314 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 BRD3Q15059 726 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 TMED2Q15363 201 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ERCC6LQ2NKX8 1250 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 GPR33Q49SQ1 333 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 PRRT3Q5FWE3 981 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 LDLRAP1Q5SW96 308 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 CERCAMQ5T4B2 595 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 SEL1L3Q68CR1 1132 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 PMS2CLQ68D20 193 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 TMEM214Q6NUQ4 689 aaKnown RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ESRP1Q6NXG1 681 aaKnown RBP4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ZNF449Q6P9G9 518 aa4.95□□□□□ -1.62
CCDC140-202ENST00000440903 ZDHHC24Q6UX98 284 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms