RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 GPS1Q13098 491 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 POU6F1Q14863 301 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 TRIP6Q15654 476 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 FAM151BQ6UXP7 276 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 DNAAF3Q8N9W5 541 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 OR13C4Q8NGS5 318 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 GRK7Q8WTQ7 553 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 TRIM44Q96DX7 344 aaPredicted RBP19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 CLPBQ9H078 707 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 CARS2Q9HA77 564 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 CASS4Q9NQ75 786 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 SUFUQ9UMX1 484 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 SLC17A4Q9Y2C5 497 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 NEU2Q9Y3R4 380 aa19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 OAS3Q9Y6K5 1087 aaKnown RBP19.33■□□□□ 0.68
SEMA3B-206ENST00000439487 NEMP2A6NFY4 417 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 TRIM38O00635 465 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 LDB2O43679 373 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 SIGLEC6O43699 453 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 PAFAH1B1P43034 410 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 ZNF140P52738 457 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 SEPT6Q14141 434 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 CHRNA6Q15825 494 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 DEFB133Q30KQ1 61 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 ATP13A5Q4VNC0 1218 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 HS1BP3Q53T59 392 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 CERCAMQ5T4B2 595 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 ZNF648Q5T619 568 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 ZDHHC20Q5W0Z9 365 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 MARK2Q7KZI7 788 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 TBATAQ96M53 351 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 C16orf45Q96MC5 204 aaPredicted RBP19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 EIF2B3Q9NR50 452 aaKnown RBP19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 FKBPLQ9UIM3 349 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 TMPRSS11EQ9UL52 423 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 CSNK1G3Q9Y6M4 447 aa19.32■□□□□ 0.68
SEMA3B-206ENST00000439487 BPTFQ12830 3046 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 GLYATL1P3A0A0U1RQE8 302 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 TCRBV7S3A2A0A539 114 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 GAPDHSO14556 408 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A9O60656 530 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 PPFIA2O75334 1257 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 SLC25A14O95258 325 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 LDOC1O95751 146 aaPredicted RBP19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A6P19224 532 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A1P22309 533 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A4P22310 534 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A3P35503 534 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A5P35504 534 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 GNPDA1P46926 289 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 PDE1BQ01064 536 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 CCDC38Q502W7 563 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 PDPK2PQ6A1A2 396 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 KLHL7Q8IXQ5 586 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 OR4C6Q8NH72 309 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 GLYATL1Q969I3 302 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 CNDP2Q96KP4 475 aaKnown RBP19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 CDC6Q99741 560 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 TMEM168Q9H0V1 697 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A7Q9HAW7 530 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A10Q9HAW8 530 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 UGT1A8Q9HAW9 530 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 NLGN3Q9NZ94 848 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 RNF14Q9UBS8 474 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 FTSJ1Q9UET6 329 aa19.31■□□□□ 0.68
SEMA3B-206ENST00000439487 CCDC78A2IDD5 438 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 CCL22O00626 93 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 YY2O15391 372 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 GPR39O43194 453 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 ECEL1O95672 775 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 GAS8O95995 478 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 IVLP07476 585 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 ANXA6P08133 673 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 ALPPL2P10696 532 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 TPSB2P20231 275 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 CA5AP35218 305 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 SIM1P81133 766 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 ELOCQ15369 112 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 PPP1R7Q15435 360 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 TPSAB1Q15661 275 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 FSTL5Q8N475 847 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 CCL4L1Q8NHW4 92 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 SCARF2Q96GP6 870 aaPredicted RBP19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 DNAJC1Q96KC8 554 aaKnown RBP19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 ATXN10Q9UBB4 475 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 DOLKQ9UPQ8 538 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 GPSM3Q9Y4H4 160 aa19.3■□□□□ 0.68
SEMA3B-206ENST00000439487 LMO7DNF2Z398 122 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 MTX2O75431 263 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 MYF5P13349 255 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 PTGIRP43119 386 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 SESN2P58004 480 aaPredicted RBP19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 KCNJ11Q14654 390 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 ANKRD22Q5VYY1 191 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 MICALCLQ6ZW33 695 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 ADGRG6Q86SQ4 1221 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 GKN2Q86XP6 184 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 PHYKPLQ8IUZ5 450 aa19.29■□□□□ 0.68
SEMA3B-206ENST00000439487 ZNF398Q8TD17 642 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms