RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 RHOT1Q8IXI2 618 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 RNF214Q8ND24 703 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 RCBTB1Q8NDN9 531 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 USP7Q93009 1102 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 RNF25Q96BH1 459 aaPredicted RBP18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 CCDC74BQ96LY2 380 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 AGAP3Q96P47 875 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC38A3Q99624 504 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 CEP41Q9BYV8 373 aa18.31■□□□□ 0.52
AC004540.1-201ENST00000439120 ZFC3H1O60293 1989 aaKnown RBP18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 MGAQ8IWI9 3026 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 TRBV23OR9-2A0A075B6M9 112 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 HGSO14964 777 aaPredicted RBP18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 C1QL1O75973 258 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 MTA2O94776 668 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC4A1P02730 911 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 CD1CP29017 333 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 ETV5P41161 510 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC1A1P43005 524 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 GPLD1P80108 840 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 C16orf72Q14CZ0 275 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 TGIF1Q15583 401 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 PCSK7Q16549 785 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 HENMT1Q5T8I9 393 aaKnown RBP18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 LRRC38Q5VT99 294 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 NKAIN2Q5VXU1 208 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 KIAA1614Q5VZ46 1190 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 CCDC70Q6NSX1 233 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 LYSMD3Q7Z3D4 306 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 CNTD1Q8N815 330 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 DPYSL5Q9BPU6 564 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 SPATA16Q9BXB7 569 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 BRD8Q9H0E9 1235 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 RMI1Q9H9A7 625 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 ZFYVE1Q9HBF4 777 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 PRKAB1Q9Y478 270 aa18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 FASNP49327 2511 aaKnown RBP18.3■□□□□ 0.52
AC004540.1-201ENST00000439120 IGHV1OR21-1A0A087WYE8 117 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 IGHV5-10-1A0A0J9YXX1 117 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 C3orf70A6NLC5 250 aaPredicted RBP18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 CSTF2P33240 577 aaKnown RBP eCLIP18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 TRA2AQ13595 282 aaKnown RBP eCLIP18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 ZNF569Q5MCW4 686 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 MANEAQ5SRI9 462 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 ALS2CLQ60I27 953 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 PCSK4Q6UW60 755 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 NPNTQ6UXI9 565 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 BZW1Q7L1Q6 419 aaKnown RBP18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 ZNF605Q86T29 641 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 ZNF843Q8N446 348 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 OR4D9Q8NGE8 314 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 OR10G6Q8NH81 332 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC37A2Q8TED4 501 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 IMP4Q96G21 291 aaKnown RBP18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 GPR63Q9BZJ6 419 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 RAD18Q9NS91 495 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 INTUQ9ULD6 942 aa18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 OAS3Q9Y6K5 1087 aaKnown RBP18.29■□□□□ 0.52
AC004540.1-201ENST00000439120 FADS2P1A8MWK0 482 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 AKR1B15C9JRZ8 316 aaPredicted RBP18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 DUX1O43812 170 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 DNAJC6O75061 913 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 ACP5P13686 325 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC2A4P14672 509 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 CD82P27701 267 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 TNNT3P45378 269 aaPredicted RBP18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 FASLGP48023 281 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 LIMK2P53671 638 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 HHEXQ03014 270 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 ZNF574Q6ZN55 896 aaPredicted RBP18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 ZFAND4Q86XD8 727 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 PHYKPLQ8IUZ5 450 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 SFRP1Q8N474 314 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 ZSCAN1Q8NBB4 408 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 AGBL5Q8NDL9 886 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 TTC9Q92623 222 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 OLFM3Q96PB7 478 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 WDR24Q96S15 920 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC25A51Q9H1U9 297 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 FOXJ2Q9P0K8 574 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 SHOC2Q9UQ13 582 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 KCNK6Q9Y257 313 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 HYOU1Q9Y4L1 999 aa18.28■□□□□ 0.52
AC004540.1-201ENST00000439120 A0A0A6YYK5 440 aaPredicted RBP18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 C9orf172C9J069 976 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 GRID2O43424 1007 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 SNX2O60749 519 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 PIRTP0C851 137 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 CCL4P13236 92 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 COMTP21964 271 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 MPSTP25325 297 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 NOP2P46087 812 aaKnown RBP18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 NR2C2P49116 596 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 CDK18Q07002 472 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 TFDP2Q14188 446 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 LY6DQ14210 128 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 SLC9B2Q86UD5 537 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 ZNF761Q86XN6 746 aaPredicted RBP18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 SH3KBP1Q96B97 665 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms