RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 HS6ST1O60243 411 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 GUCY1B2O75343 617 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 CRCPO75575 148 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 USP2O75604 605 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-204ENST00000438964 THRBP10828 461 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 TGM1P22735 817 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 MTHFRP42898 656 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 COPZ1P61923 177 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 CTF1Q16619 201 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 CELF3Q5SZQ8 465 aaKnown RBP13.33□□□□□ -0.28
ACTN1-204ENST00000438964 SCML4Q8N228 414 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 PACRGLQ8N7B6 248 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 DUS3LQ96G46 650 aaKnown RBP13.33□□□□□ -0.28
ACTN1-204ENST00000438964 TEKT5Q96M29 485 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 CDK15Q96Q40 435 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 FAM49AQ9H0Q0 323 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-204ENST00000438964 CD320Q9NPF0 282 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 POLG2Q9UHN1 485 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 FBXO10Q9UK96 956 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 PDE10AQ9Y233 779 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 OAS3Q9Y6K5 1087 aaKnown RBP13.33□□□□□ -0.28
ACTN1-204ENST00000438964 TCRBV5S2A0A599 114 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 SNX2O60749 519 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 MITFO75030 526 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 CLASP2O75122 1294 aaKnown RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 C1RP00736 705 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 LTA4HP09960 611 aaKnown RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 NPY2RP49146 381 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 CSRP3P50461 194 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 TKTL1P51854 596 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 SMN1Q16637 294 aaKnown RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 GLYATQ6IB77 296 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 USP51Q70EK9 711 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 C8orf59Q8N0T1 100 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 FAR2Q96K12 515 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 NACA2Q9H009 215 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 PLEKHA5Q9HAU0 1116 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 MARCH4Q9P2E8 410 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 OR12D3Q9UGF7 316 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 TTC3P53804 2025 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 SYCE1LA8MT33 242 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 FAM47E-STBD1D6RA91 191 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 GNGT2O14610 69 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 ENPP3O14638 875 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 SSX4O60224 188 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 GJB3O75712 270 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 DGKQP52824 942 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 CXCL9Q07325 125 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 PAFAH1B3Q15102 231 aaKnown RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 COLEC12Q5KU26 742 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 UGT3A1Q6NUS8 523 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 STRADAQ7RTN6 431 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 FAM83FQ8NEG4 500 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 ZUFSPQ96AP4 578 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 KIFC1Q9BW19 673 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 TKTL2Q9H0I9 626 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 NXF3Q9H4D5 531 aaKnown RBP13.32□□□□□ -0.28
ACTN1-204ENST00000438964 AKIP1Q9NQ31 210 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 PCDHA9Q9Y5H5 950 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 MCM3APO60318 1980 aa13.32□□□□□ -0.28
ACTN1-204ENST00000438964 LINC00854A0A1B0GVQ3 168 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 FADS2O95864 444 aaKnown RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 KCNAB2Q13303 367 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 SIM2Q14190 667 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 PCID2Q5JVF3 399 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 ZNF678Q5SXM1 525 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 AGAP9Q5VTM2 703 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 PLEKHG7Q6ZR37 379 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 POC5Q8NA72 575 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 CHDHQ8NE62 594 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 PPHLN1Q8NEY8 458 aaKnown RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 ERVK-18Q9QC07 812 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 ERVK-11Q9UQG0 969 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 SNX5Q9Y5X3 404 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 SIP14410 1827 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 COL4A5P29400 1685 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 MYLKQ15746 1914 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 TNPO2O14787 897 aaKnown RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 GOT2P00505 430 aaKnown RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 FTH1P02794 183 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 FYNP06241 537 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 SERPINB1P30740 379 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 ARSDP51689 593 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 RACK1P63244 317 aaKnown RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 IL5RAQ01344 420 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 YWHAHQ04917 246 aaPredicted RBP13.31□□□□□ -0.28
ACTN1-204ENST00000438964 SMUG1Q53HV7 270 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 HECTD2Q5U5R9 776 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 LAIR2Q6ISS4 152 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 BNIPLQ7Z465 357 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 LINC00523Q86TU6 105 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 FAM83AQ86UY5 434 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 GATAD2AQ86YP4 633 aa13.31□□□□□ -0.28
ACTN1-204ENST00000438964 DTWD1Q8N5C7 304 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms