RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 AP4B1Q9Y6B7 739 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 A0A0J9YYE9 177 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 TCRBV3S1A0A5B6 114 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 ENO4A6NNW6 628 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 ECI2O75521 394 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 STC2O76061 302 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 F11P03951 625 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 KLKB1P03952 638 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 PYGLP06737 847 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 LPOP22079 712 aaPredicted RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 CORO1AP31146 461 aaKnown RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 SGSHP51688 502 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 ZNF177Q13360 481 aaPredicted RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 TSNQ15631 228 aaKnown RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 RETREG3Q86VR2 466 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 MIER2Q8N344 545 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 NKAPQ8N5F7 415 aaKnown RBP18.49■□□□□ 0.55
CLK1-205ENST00000434813 BIRC8Q96P09 236 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 CYP2S1Q96SQ9 504 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 TUBB1Q9H4B7 451 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 AP4S1Q9Y587 144 aa18.49■□□□□ 0.55
CLK1-205ENST00000434813 TBKBP1A7MCY6 615 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 STX16O14662 325 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 KLK8O60259 260 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 VPS4BO75351 444 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 MATN4O95460 622 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 CD9P21926 228 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 SLC7A2P52569 658 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 IRAK1BP1Q5VVH5 260 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 DEFB128Q7Z7B8 93 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 DDIASQ8IXT1 998 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 LRRC43Q8N309 656 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 FUBP1Q96AE4 644 aaKnown RBP18.48■□□□□ 0.55
CLK1-205ENST00000434813 KCNA7Q96RP8 456 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 GPR21Q99679 349 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 GPATCH1Q9BRR8 931 aaKnown RBP18.48■□□□□ 0.55
CLK1-205ENST00000434813 POLG2Q9UHN1 485 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 RAI2Q9Y5P3 530 aa18.48■□□□□ 0.55
CLK1-205ENST00000434813 CBX4O00257 560 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 NR5A2O00482 541 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 LBPP18428 481 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 GRIA2P42262 883 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 TTPAP49638 278 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 TLE2Q04725 743 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 PTPRNQ16849 979 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 TCTN1Q2MV58 587 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 TRIM60Q495X7 471 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 ANKS6Q68DC2 871 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 LAYNQ6UX15 382 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 TOX2Q96NM4 488 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 ZBED2Q9BTP6 218 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 SDR39U1Q9NRG7 319 aaPredicted RBP18.47■□□□□ 0.55
CLK1-205ENST00000434813 ABCD2Q9UBJ2 740 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 NDUFAF1Q9Y375 327 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 BACE2Q9Y5Z0 518 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.47■□□□□ 0.55
CLK1-205ENST00000434813 PFDN6O15212 129 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 VPS26AO75436 327 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 EFEMP2O95967 443 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 CXCL10P02778 98 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 HMGA1P17096 107 aaKnown RBP18.47■□□□□ 0.55
CLK1-205ENST00000434813 SLC7A1P30825 629 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 GRB7Q14451 532 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 ADGRF1Q5T601 910 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 CXorf57Q6NSI4 855 aaKnown RBP18.47■□□□□ 0.55
CLK1-205ENST00000434813 PSAPL1Q6NUJ1 521 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 PRMT9Q6P2P2 845 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 TXNDC11Q6PKC3 985 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 SLC30A9Q6PML9 568 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 TUBGCP3Q96CW5 907 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 UHRF1Q96T88 793 aaPredicted RBP18.47■□□□□ 0.55
CLK1-205ENST00000434813 NUSAP1Q9BXS6 441 aaKnown RBP18.47■□□□□ 0.55
CLK1-205ENST00000434813 ADGRE3Q9BY15 652 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 PAPOLBQ9NRJ5 636 aaKnown RBP18.47■□□□□ 0.55
CLK1-205ENST00000434813 UBAP1Q9NZ09 502 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 GIMAP2Q9UG22 337 aa18.47■□□□□ 0.55
CLK1-205ENST00000434813 NPEPPSL1A6NEC2 478 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 ANKRD66B4E2M5 251 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 H0YJX3 145 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 CDC7O00311 574 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 TSPAN12O95859 305 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 PABPC4LP0CB38 370 aaKnown RBP18.46■□□□□ 0.55
CLK1-205ENST00000434813 SMIM18P0DKX4 95 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 PKMP14618 531 aaKnown RBP18.46■□□□□ 0.55
CLK1-205ENST00000434813 CAPN3P20807 821 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 MC4RP32245 332 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 COQ5Q5HYK3 327 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 OGFOD2Q6N063 350 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 FBXO46Q6PJ61 603 aaPredicted RBP18.46■□□□□ 0.55
CLK1-205ENST00000434813 PIANPQ8IYJ0 282 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 ZNF483Q8TF39 744 aaPredicted RBP18.46■□□□□ 0.55
CLK1-205ENST00000434813 PBXIP1Q96AQ6 731 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 SMIM14Q96QK8 99 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 HOPXQ9BPY8 73 aaPredicted RBP18.46■□□□□ 0.55
CLK1-205ENST00000434813 SLC39A3Q9BRY0 314 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 SPATA16Q9BXB7 569 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 FKBPLQ9UIM3 349 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 PCDHGC4Q9Y5F7 938 aa18.46■□□□□ 0.55
CLK1-205ENST00000434813 A0A1B0GTL3 188 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms