RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 CROCCQ5TZA2 2017 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TFAP2AP05549 437 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TBCCQ15814 346 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TECRLQ5HYJ1 363 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TRAF7Q6Q0C0 670 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 ISCA2Q86U28 154 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 METTL25Q8N6Q8 603 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 C8orf48Q96LL4 319 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 LATS2Q9NRM7 1088 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 ASB1Q9Y576 335 aa15.51■□□□□ 0.07
SCARF1-203ENST00000434376 TRIM24O15164 1050 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 HGFP14210 728 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 STX1BP61266 288 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 DEFB103AP81534 67 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 TRIM60Q495X7 471 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 KRT80Q6KB66 452 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 UGT2A3Q6UWM9 527 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 SPPL2BQ8TCT7 592 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 GRIN3AQ8TCU5 1115 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 EEF1AKMT1Q8WVE0 214 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 BOCQ9BWV1 1114 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 NSMCE4AQ9NXX6 385 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 ZNF839A8K0R7 811 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 VILLO15195 856 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 SLC7A2P52569 658 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 HPCAP84074 193 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 NRG1Q02297 640 aaPredicted RBP15.5■□□□□ 0.07
SCARF1-203ENST00000434376 PIWIL4Q7Z3Z4 852 aaKnown RBP15.5■□□□□ 0.07
SCARF1-203ENST00000434376 NPAS4Q8IUM7 802 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 FUBP3Q96I24 572 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCARF1-203ENST00000434376 PRKD2Q9BZL6 878 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 MTG2Q9H4K7 406 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 EFCAB1Q9HAE3 211 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 EIF2B4Q9UI10 523 aaKnown RBP15.5■□□□□ 0.07
SCARF1-203ENST00000434376 RAD54BQ9Y620 910 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 CPQQ9Y646 472 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 SNX2O60749 519 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 STC2O76061 302 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 RPL10P27635 214 aaKnown RBP15.5■□□□□ 0.07
SCARF1-203ENST00000434376 GABRR2P28476 465 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 BFSP2Q13515 415 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 PABPC1LQ4VXU2 614 aaKnown RBP15.5■□□□□ 0.07
SCARF1-203ENST00000434376 MBOAT1Q6ZNC8 495 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 APCDD1Q8J025 514 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 FBXO39Q8N4B4 442 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 CLHC1Q8NHS4 586 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 VPS45Q9NRW7 570 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 SEPT3Q9UH03 358 aa15.5■□□□□ 0.07
SCARF1-203ENST00000434376 ZNF840PA6NDX5 716 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 CLASP2O75122 1294 aaKnown RBP15.49■□□□□ 0.07
SCARF1-203ENST00000434376 CNPP09543 421 aaKnown RBP15.49■□□□□ 0.07
SCARF1-203ENST00000434376 NCK1P16333 377 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 HOXD9P28356 352 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-203ENST00000434376 NDST2P52849 883 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 MAPK10P53779 464 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 USP41Q3LFD5 358 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 ANKS3Q6ZW76 656 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 LYSMD3Q7Z3D4 306 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 DNAJB7Q7Z6W7 309 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-203ENST00000434376 HS6ST3Q8IZP7 471 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 JADE3Q92613 823 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 DPF3Q92784 378 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 LINGO1Q96FE5 620 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 A0A1W2PRU2 124 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 SAC3D1A6NKF1 404 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 UPK3BL1B0FP48 263 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 UPK3BL2E5RIL1 263 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 MRASO14807 208 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 PRAMEF11O60813 436 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 CSKP41240 450 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 PPP1R8Q12972 351 aaKnown RBP15.49■□□□□ 0.07
SCARF1-203ENST00000434376 CBX2Q14781 532 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-203ENST00000434376 RFLNAQ6ZTI6 216 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 FRA10AC1Q70Z53 315 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 RAB44Q7Z6P3 723 aaPredicted RBP15.49■□□□□ 0.07
SCARF1-203ENST00000434376 TMIGD2Q96BF3 282 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 FAM210AQ96ND0 272 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 AKTIPQ9H8T0 292 aa15.49■□□□□ 0.07
SCARF1-203ENST00000434376 A0A0J9YVX5 310 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 ARHGAP10A1A4S6 786 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 C2orf81A6NN90 581 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 APOA4P06727 396 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 FAM58BPP0C7Q3 252 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 CLCN5P51795 746 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 PSME3P61289 254 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 IL10RBQ08334 325 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 TRAF2Q12933 501 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 C16orf72Q14CZ0 275 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 PTRHD1Q6GMV3 140 aaKnown RBP15.48■□□□□ 0.07
SCARF1-203ENST00000434376 SLC22A17Q8WUG5 538 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 CLSTN3Q9BQT9 956 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCARF1-203ENST00000434376 ANKRD6Q9Y2G4 727 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 SLC30A1Q9Y6M5 507 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 C1orf232A0A0U1RR37 186 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 OR6C75A6NL08 312 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 SYN3O14994 580 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 ALDH1A1P00352 501 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 CDH15P55291 814 aa15.48■□□□□ 0.07
SCARF1-203ENST00000434376 ACTRT2Q8TDY3 377 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms