RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DLL3Q9NYJ7 618 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 KLF15Q9UIH9 416 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 FKBPLQ9UIM3 349 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 APPL1Q9UKG1 709 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 BTBD3Q9Y2F9 522 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 GPSM3Q9Y4H4 160 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 SLC30A1Q9Y6M5 507 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 PLXNB3Q9ULL4 1909 aa15.41■□□□□ 0.06
TREX1-201ENST00000433541 GOLGA4Q13439 2230 aaKnown RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 CNOT1A5YKK6 2376 aaKnown RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 HEATR9A2RTY3 570 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 KIF2AO00139 706 aaPredicted RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 AP3B1O00203 1094 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 TNFRSF10CO14798 259 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 SUN1O94901 812 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 PRAMEF1O95521 474 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 AKT1P31749 480 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 DAB2P98082 770 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 CKAP4Q07065 602 aaKnown RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 GTF2H3Q13889 308 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 CHRNA6Q15825 494 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 DEFB133Q30KQ1 61 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 PDPK2PQ6A1A2 396 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 CASC4Q6P4E1 433 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 TAF8Q7Z7C8 310 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 GALNT13Q8IUC8 556 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 FSTL5Q8N475 847 aaPredicted RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 SCG3Q8WXD2 468 aaKnown RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 GLYATL1Q969I3 302 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 DNAJC1Q96KC8 554 aaKnown RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 KRT12Q99456 494 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 CDC6Q99741 560 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 LRRC61Q9BV99 259 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 IL26Q9NPH9 171 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 BFARQ9NZS9 450 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 NFKBIL1Q9UBC1 381 aaPredicted RBP15.4■□□□□ 0.06
TREX1-201ENST00000433541 ZNHIT2Q9UHR6 403 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 CRLS1Q9UJA2 301 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 PCOLCE2Q9UKZ9 415 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 SUFUQ9UMX1 484 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 PCNX2A6NKB5 2137 aa15.4■□□□□ 0.06
TREX1-201ENST00000433541 GOLGA8MH3BSY2 632 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 CCL22O00626 93 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 LDOC1O95751 146 aaPredicted RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 CEACAM5P06731 702 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 TPSB2P20231 275 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 ITGALP20701 1170 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 CSRP1P21291 193 aaKnown RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 ZNF140P52738 457 aaPredicted RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 CDK16Q00536 496 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 ILF3Q12906 894 aaKnown RBP eCLIP15.39■□□□□ 0.05
TREX1-201ENST00000433541 TRIP6Q15654 476 aaKnown RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 TPSAB1Q15661 275 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 SKIDA1Q1XH10 827 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 ATP13A5Q4VNC0 1218 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 ZRANB3Q5FWF4 1079 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 PPM1JQ5JR12 505 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 ZNF648Q5T619 568 aaPredicted RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 GKN2Q86XP6 184 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 CNDP2Q96KP4 475 aaKnown RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 FRMD8Q9BZ67 464 aaPredicted RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 ZCCHC2Q9C0B9 1178 aaKnown RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 OR2AG1Q9H205 316 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 ASB8Q9H765 288 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 CASS4Q9NQ75 786 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 EVA1BQ9NVM1 165 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 NLGN3Q9NZ94 848 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 SAMD15Q9P1V8 674 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 PCYOX1Q9UHG3 505 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 PNMA8BQ9ULN7 279 aaPredicted RBP15.39■□□□□ 0.05
TREX1-201ENST00000433541 DGKBQ9Y6T7 804 aa15.39■□□□□ 0.05
TREX1-201ENST00000433541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.38■□□□□ 0.05
TREX1-201ENST00000433541 SPAARA0A1B0GVQ0 90 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 GIPC1O14908 333 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 GPR39O43194 453 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 LDB2O43679 373 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A9O60656 530 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 MTX2O75431 263 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 SRP72O76094 671 aaKnown RBP15.38■□□□□ 0.05
TREX1-201ENST00000433541 KCNK5O95279 499 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 CEACAM1P13688 526 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A6P19224 532 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A1P22309 533 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A4P22310 534 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 ADRA1DP25100 572 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 MC4RP32245 332 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A3P35503 534 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 UGT1A5P35504 534 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 CRADDP78560 199 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 SIM1P81133 766 aaPredicted RBP15.38■□□□□ 0.05
TREX1-201ENST00000433541 PTK6Q13882 451 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 KCNJ11Q14654 390 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 KCTD16Q68DU8 428 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 CRTC3Q6UUV7 619 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 SYDE1Q6ZW31 735 aaPredicted RBP15.38■□□□□ 0.05
TREX1-201ENST00000433541 CHST15Q7LFX5 561 aaPredicted RBP15.38■□□□□ 0.05
TREX1-201ENST00000433541 TAS2R42Q7RTR8 314 aa15.38■□□□□ 0.05
TREX1-201ENST00000433541 PIP4P1Q86T03 277 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms