RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 TBL1YQ9BQ87 522 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 RNF38Q9H0F5 515 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 SIK2Q9H0K1 926 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 DDX28Q9NUL7 540 aaKnown RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 RCOR3Q9P2K3 495 aaPredicted RBP11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 STAP1Q9ULZ2 295 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 PCDHA9Q9Y5H5 950 aa11.51□□□□□ -0.57
HMGCS1-202ENST00000433297 CCDC154A6NI56 674 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ZNF99A8MXY4 864 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 LBPP18428 481 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 IMPDH1P20839 514 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ARNTP27540 789 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ADRA1BP35368 520 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CXCR3P49682 368 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 IFITM2Q01629 132 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 POU4F1Q01851 419 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CTU2Q2VPK5 515 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 RBM48Q5RL73 367 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 DCP1BQ8IZD4 617 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 PTGR2Q8N8N7 351 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CNIH3Q8TBE1 160 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 FIG4Q92562 907 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 SEMA4BQ9NPR2 832 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 PRMT7Q9NVM4 692 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 FAM118AQ9NWS6 357 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 NUDT5Q9UKK9 219 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 UTRNP46939 3433 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 TCRBV5S2A0A599 114 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 NOTOA8MTQ0 251 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 SOAT2O75908 522 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CSRP3P50461 194 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 BACE1P56817 501 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 MTPNP58546 118 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CCNA1P78396 465 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CHRNB3Q05901 458 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ACAP2Q15057 778 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 PLA2G4EQ3MJ16 856 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ZNF678Q5SXM1 525 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 TTC23Q5W5X9 447 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CYP2U1Q7Z449 544 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 PLD3Q8IV08 490 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 MMAAQ8IVH4 418 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 SLC22A9Q8IVM8 553 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 DCBLD1Q8N8Z6 715 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CHDHQ8NE62 594 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 COPS5Q92905 334 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ZNF486Q96H40 463 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 NTN4Q9HB63 628 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 NEK6Q9HC98 313 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 PRDM8Q9NQV8 689 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 TRHDEQ9UKU6 1024 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 OAS3Q9Y6K5 1087 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ZBTB42B2RXF5 422 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 AZIN1O14977 448 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 CAPN15O75808 1086 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 PAMP19021 973 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ARPC4P59998 168 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 UFM1P61960 85 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 YWHAHQ04917 246 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 UNC50Q53HI1 259 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 SMUG1Q53HV7 270 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 GADL1Q6ZQY3 521 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 USP43Q70EL4 1123 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 TFAP2DQ7Z6R9 452 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 NUDT8Q8WV74 236 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 PABPC5Q96DU9 382 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 ASPSCR1Q9BZE9 553 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 C6orf62Q9GZU0 229 aaPredicted RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 TRIT1Q9H3H1 467 aaKnown RBP11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 C8orf4Q9NR00 106 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 DDIT4Q9NX09 232 aa11.5□□□□□ -0.57
HMGCS1-202ENST00000433297 TAF4O00268 1085 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 RAD51BO15315 384 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 BEST1O76090 585 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 CDK14O94921 469 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 ALPLP05186 524 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 GSNP06396 782 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 ENO2P09104 434 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 HNRNPFP52597 415 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 EMX1Q04741 257 aaPredicted RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 KCNAB2Q13303 367 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 IRAK1BP1Q5VVH5 260 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 TTC39CQ8N584 583 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 MINDY2Q8NBR6 621 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 LEMD2Q8NC56 503 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 SH3RF2Q8TEC5 729 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 STON2Q8WXE9 905 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 EDEM1Q92611 657 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 RPL3LQ92901 407 aaKnown RBP11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 WNT8BQ93098 351 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 FEM1AQ9BSK4 669 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 MED10Q9BTT4 135 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
HMGCS1-202ENST00000433297 SNTG2Q9NY99 539 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms