RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 KCNJ9Q92806 393 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 EXT2Q93063 718 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 NPAS2Q99743 824 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 ECSITQ9BQ95 431 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 TUBB1Q9H4B7 451 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 MRPL17Q9NRX2 175 aaKnown RBP13.87□□□□□ -0.19
HOXC4-202ENST00000430889 PCDHGA7Q9Y5G6 932 aa13.87□□□□□ -0.19
HOXC4-202ENST00000430889 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 A0A1B0GTL3 188 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 A6NHS1 94 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 K7ERQ8 282 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 PSMD12O00232 456 aaPredicted RBP13.86□□□□□ -0.19
HOXC4-202ENST00000430889 AZIN1O14977 448 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 NIPSNAP2O75323 286 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 VPS26AO75436 327 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 ZNF821O75541 412 aaPredicted RBP13.86□□□□□ -0.19
HOXC4-202ENST00000430889 SMNDC1O75940 238 aaKnown RBP eCLIP13.86□□□□□ -0.19
HOXC4-202ENST00000430889 PYGLP06737 847 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 CLTBP09497 229 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 HDCP19113 662 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 GPX3P22352 226 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 HMGCLP35914 325 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 PTGER3P43115 390 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 HK3P52790 923 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 FOXA1P55317 472 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 NAA20P61599 178 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 MS4A2Q01362 244 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 FASTKQ14296 549 aaKnown RBP13.86□□□□□ -0.19
HOXC4-202ENST00000430889 MAPRE2Q15555 327 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 ZRSR2Q15696 482 aaKnown RBP13.86□□□□□ -0.19
HOXC4-202ENST00000430889 AARS2Q5JTZ9 985 aaKnown RBP13.86□□□□□ -0.19
HOXC4-202ENST00000430889 MPP7Q5T2T1 576 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 REP15Q6BDI9 236 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 HACD2Q6Y1H2 254 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 RAB44Q7Z6P3 723 aaPredicted RBP13.86□□□□□ -0.19
HOXC4-202ENST00000430889 FUNDC1Q8IVP5 155 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 FBXO39Q8N4B4 442 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 MYO19Q96H55 970 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 CCDC68Q9H2F9 335 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 BPIFA1Q9NP55 256 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 TMEM39AQ9NV64 488 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 CACNA2D2Q9NY47 1150 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 PACSIN3Q9UKS6 424 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 RNF112Q9ULX5 631 aa13.86□□□□□ -0.19
HOXC4-202ENST00000430889 ANKRD12Q6UB98 2062 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CXorf51AA0A1B0GTR3 108 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 NPEPPSL1A6NEC2 478 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 SYCE1LA8MT33 242 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 SUPT3HB4E1H0 165 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 SUPT3HO75486 399 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 BCAS2O75934 225 aaPredicted RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 BAG2O95816 211 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ESR1P03372 595 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PRR35P0CG20 571 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 BMP1P13497 986 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ENO3P13929 434 aaPredicted RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 EEF1DP29692 281 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 MRPL19P49406 292 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CLCN7P51798 805 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 RPL26P61254 145 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 HTRA3P83110 453 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CYP4F8P98187 520 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CLCQ05315 142 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CACNG1Q06432 222 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 LCP2Q13094 533 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CDH18Q13634 790 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 FAM117BQ6P1L5 589 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 LYSMD3Q7Z3D4 306 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 SIDT2Q8NBJ9 832 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 GDPD5Q8WTR4 605 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 TWIST2Q8WVJ9 160 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PDLIM5Q96HC4 596 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CXorf56Q9H5V9 222 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 AKTIPQ9H8T0 292 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 FBRSL1Q9HCM7 1045 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 MID1IP1Q9NPA3 183 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CLEC4EQ9ULY5 219 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PSMD13Q9UNM6 376 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ATP11BQ9Y2G3 1177 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PCDHB9Q9Y5E1 797 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 DOCK6Q96HP0 2047 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 TRBV5-4A0A0C4DH59 114 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 TYW5A2RUC4 315 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PIP5K1BO14986 540 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 TRIM24O15164 1050 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PFDN6O15212 129 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 SMAD6O43541 496 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 TGM5O43548 720 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CNPP09543 421 aaKnown RBP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CTSAP10619 480 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 GFAPP14136 432 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 RAG1P15918 1043 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 ME2P23368 584 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 RPS3P23396 243 aaKnown RBP eCLIP13.85□□□□□ -0.19
HOXC4-202ENST00000430889 GABRR2P28476 465 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 CA5AP35218 305 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PPM1AP35813 382 aa13.85□□□□□ -0.19
HOXC4-202ENST00000430889 PKNOX1P55347 436 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms