RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 L1CAMP32004 1257 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 HNF4AP41235 474 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 MARCKSL1P49006 195 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 OR10G6Q8NH81 332 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 SLC25A51Q9H1U9 297 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 DSN1Q9H410 356 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 ACP6Q9NPH0 428 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
LDB3-205ENST00000429277 CLDN5O00501 218 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 CLDN9O95484 217 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 C22orf31O95567 290 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 TOP3BO95985 862 aaKnown RBP12.74□□□□□ -0.37
LDB3-205ENST00000429277 C1RP00736 705 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 DBTP11182 482 aaKnown RBP12.74□□□□□ -0.37
LDB3-205ENST00000429277 CMPK1P30085 196 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 ICAM3P32942 547 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 RAB2AP61019 212 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 PTPN20Q4JDL3 420 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 CCNYL2Q5T2Q4 361 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 POC5Q8NA72 575 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 DNAJB8Q8NHS0 232 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 IL31RAQ8NI17 732 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 EXOC2Q96KP1 924 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 RBM4BQ9BQ04 359 aaKnown RBP12.74□□□□□ -0.37
LDB3-205ENST00000429277 RBM4Q9BWF3 364 aaKnown RBP12.74□□□□□ -0.37
LDB3-205ENST00000429277 RASSF1Q9NS23 344 aa12.74□□□□□ -0.37
LDB3-205ENST00000429277 IMP3Q9NV31 184 aaKnown RBP12.74□□□□□ -0.37
LDB3-205ENST00000429277 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 NEDD8-MDP1E9PL57 170 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 PAPSS1O43252 624 aaPredicted RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 KERAO60938 352 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 VIPP01282 170 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 TACR2P21452 398 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 PBX3P40426 434 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 VPS26BQ4G0F5 336 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 TIGD2Q4W5G0 525 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 C12orf29Q8N999 325 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 PLD4Q96BZ4 506 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 SEC14L3Q9UDX4 400 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 ZNF490Q9ULM2 529 aaPredicted RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 RBM7Q9Y580 266 aaKnown RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 RAI2Q9Y5P3 530 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 LIN7AO14910 233 aaPredicted RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 CDK14O94921 469 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 BRCC3P46736 316 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 UBAP2LQ14157 1087 aaKnown RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 PQLC1Q8N2U9 271 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 CRELD1Q96HD1 420 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 CAPN15O75808 1086 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 GSTT1P30711 240 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 PRMT2P55345 433 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 ACAP2Q15057 778 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 GCNT6Q5T4J0 391 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 CRTC3Q6UUV7 619 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 ATCAYQ86WG3 371 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 CERS5Q8N5B7 392 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 ABHD14A-ACY1A0A1B0GW23 586 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 EPHB6O15197 1021 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 PIRTP0C851 137 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 GIMD1P0DJR0 217 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 PRPS2P11908 318 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 CORO1AP31146 461 aaKnown RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 POLR2JP52435 117 aaKnown RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 RIPK1Q13546 671 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 CEP68Q76N32 757 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 JAZF1Q86VZ6 243 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 KBTBD2Q8IY47 623 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.73□□□□□ -0.37
LDB3-205ENST00000429277 PJA1Q8NG27 643 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 METTL21AQ8WXB1 218 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 ABCG4Q9H172 646 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 DMTF1Q9Y222 760 aa12.73□□□□□ -0.37
LDB3-205ENST00000429277 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
LDB3-205ENST00000429277 E9PAM4 449 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 XKRYO14609 159 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 DUSP11O75319 330 aaKnown RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 POP4O95707 220 aaKnown RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 ITPKBP27987 946 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 MNDAP41218 407 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 DUSP4Q13115 394 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 DDI2Q5TDH0 399 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 OR4K2Q8NGD2 314 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 JOSD2Q8TAC2 188 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 RAD51AP1Q96B01 352 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 PLEKHG4BQ96PX9 1271 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 TLE6Q9H808 572 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 AREL1O15033 823 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 TULP3O75386 442 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 KRT36O76013 467 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 DHFRP00374 187 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 LAMP2P13473 410 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 CBX5P45973 191 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 FOLH1Q04609 750 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms