RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 PSD2Q9BQI7 771 aa8.8□□□□□ -1
CDH13-202ENST00000428848 C9orf16Q9BUW7 83 aa8.8□□□□□ -1
CDH13-202ENST00000428848 ERVK-6Q9BXR3 956 aa8.8□□□□□ -1
CDH13-202ENST00000428848 TRIM15Q9C019 465 aa8.8□□□□□ -1
CDH13-202ENST00000428848 SLC25A51Q9H1U9 297 aa8.8□□□□□ -1
CDH13-202ENST00000428848 SEPT3Q9UH03 358 aa8.8□□□□□ -1
CDH13-202ENST00000428848 CDC14AQ9UNH5 594 aa8.8□□□□□ -1
CDH13-202ENST00000428848 PCDHA9Q9Y5H5 950 aa8.8□□□□□ -1
CDH13-202ENST00000428848 TRPV2Q9Y5S1 764 aa8.8□□□□□ -1
CDH13-202ENST00000428848 ANKRD36A6QL64 1941 aa8.8□□□□□ -1
CDH13-202ENST00000428848 TCRBV5S2A0A599 114 aa8.79□□□□□ -1
CDH13-202ENST00000428848 MROH6A6NGR9 719 aa8.79□□□□□ -1
CDH13-202ENST00000428848 FAM47E-STBD1D6RA91 191 aa8.79□□□□□ -1
CDH13-202ENST00000428848 CFAP99D6REC4 459 aa8.79□□□□□ -1
CDH13-202ENST00000428848 H3BMQ9 156 aa8.79□□□□□ -1
CDH13-202ENST00000428848 GIPC1O14908 333 aa8.79□□□□□ -1
CDH13-202ENST00000428848 PFDN6O15212 129 aa8.79□□□□□ -1
CDH13-202ENST00000428848 GPR182O15218 404 aa8.79□□□□□ -1
CDH13-202ENST00000428848 SLC7A4O43246 635 aa8.79□□□□□ -1
CDH13-202ENST00000428848 AOC2O75106 756 aa8.79□□□□□ -1
CDH13-202ENST00000428848 SUPT7LO94864 414 aa8.79□□□□□ -1
CDH13-202ENST00000428848 ATE1O95260 518 aa8.79□□□□□ -1
CDH13-202ENST00000428848 S1PR4O95977 384 aa8.79□□□□□ -1
CDH13-202ENST00000428848 MT-CO1P00395 513 aa8.79□□□□□ -1
CDH13-202ENST00000428848 GPIP06744 558 aa8.79□□□□□ -1
CDH13-202ENST00000428848 PABPC1P11940 636 aaKnown RBP8.79□□□□□ -1
CDH13-202ENST00000428848 CD1DP15813 335 aa8.79□□□□□ -1
CDH13-202ENST00000428848 IL10P22301 178 aa8.79□□□□□ -1
CDH13-202ENST00000428848 JAK1P23458 1154 aa8.79□□□□□ -1
CDH13-202ENST00000428848 RPL9P32969 192 aaKnown RBP8.79□□□□□ -1
CDH13-202ENST00000428848 PRAMEP78395 509 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TIAL1Q01085 375 aaKnown RBP eCLIP8.79□□□□□ -1
CDH13-202ENST00000428848 NR1D2Q14995 579 aa8.79□□□□□ -1
CDH13-202ENST00000428848 NOMO2Q5JPE7 1267 aa8.79□□□□□ -1
CDH13-202ENST00000428848 BRMS1LQ5PSV4 323 aa8.79□□□□□ -1
CDH13-202ENST00000428848 GPR158Q5T848 1215 aa8.79□□□□□ -1
CDH13-202ENST00000428848 KANK2Q63ZY3 851 aa8.79□□□□□ -1
CDH13-202ENST00000428848 OGFOD2Q6N063 350 aa8.79□□□□□ -1
CDH13-202ENST00000428848 C17orf99Q6UX52 265 aa8.79□□□□□ -1
CDH13-202ENST00000428848 SPPL2CQ8IUH8 684 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TRPV3Q8NET8 790 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TSPEARQ8WU66 669 aa8.79□□□□□ -1
CDH13-202ENST00000428848 PPP1R13LQ8WUF5 828 aa8.79□□□□□ -1
CDH13-202ENST00000428848 SEPT8Q92599 483 aa8.79□□□□□ -1
CDH13-202ENST00000428848 CNDP2Q96KP4 475 aaKnown RBP8.79□□□□□ -1
CDH13-202ENST00000428848 NSMCE3Q96MG7 304 aa8.79□□□□□ -1
CDH13-202ENST00000428848 COG8Q96MW5 612 aa8.79□□□□□ -1
CDH13-202ENST00000428848 CTRCQ99895 268 aa8.79□□□□□ -1
CDH13-202ENST00000428848 RTP3Q9BQQ7 232 aa8.79□□□□□ -1
CDH13-202ENST00000428848 FSD1LQ9BXM9 530 aa8.79□□□□□ -1
CDH13-202ENST00000428848 MFSD1Q9H3U5 465 aa8.79□□□□□ -1
CDH13-202ENST00000428848 ARMC7Q9H6L4 198 aa8.79□□□□□ -1
CDH13-202ENST00000428848 ALG9Q9H6U8 611 aa8.79□□□□□ -1
CDH13-202ENST00000428848 CATSPERBQ9H7T0 1116 aa8.79□□□□□ -1
CDH13-202ENST00000428848 SDR39U1Q9NRG7 319 aaPredicted RBP8.79□□□□□ -1
CDH13-202ENST00000428848 CACNG4Q9UBN1 327 aa8.79□□□□□ -1
CDH13-202ENST00000428848 ZNF639Q9UID6 485 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TTC3P53804 2025 aa8.79□□□□□ -1
CDH13-202ENST00000428848 DYTNA2CJ06 578 aa8.79□□□□□ -1
CDH13-202ENST00000428848 FAM149AA5PLN7 773 aa8.79□□□□□ -1
CDH13-202ENST00000428848 WASH4PA8MWX3 477 aa8.79□□□□□ -1
CDH13-202ENST00000428848 ARPC2O15144 300 aa8.79□□□□□ -1
CDH13-202ENST00000428848 PAGE1O75459 146 aa8.79□□□□□ -1
CDH13-202ENST00000428848 THP07101 528 aa8.79□□□□□ -1
CDH13-202ENST00000428848 MTHFD2P13995 350 aa8.79□□□□□ -1
CDH13-202ENST00000428848 GFAPP14136 432 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TSPAN8P19075 237 aa8.79□□□□□ -1
CDH13-202ENST00000428848 FDXRP22570 491 aa8.79□□□□□ -1
CDH13-202ENST00000428848 PCSK1P29120 753 aa8.79□□□□□ -1
CDH13-202ENST00000428848 OXTRP30559 389 aa8.79□□□□□ -1
CDH13-202ENST00000428848 GSSP48637 474 aa8.79□□□□□ -1
CDH13-202ENST00000428848 SERPINH1P50454 418 aaKnown RBP8.79□□□□□ -1
CDH13-202ENST00000428848 NRG1Q02297 640 aaPredicted RBP8.79□□□□□ -1
CDH13-202ENST00000428848 PMS2P3Q13401 168 aa8.79□□□□□ -1
CDH13-202ENST00000428848 IHHQ14623 411 aa8.79□□□□□ -1
CDH13-202ENST00000428848 PHKG1Q16816 387 aa8.79□□□□□ -1
CDH13-202ENST00000428848 VPS26BQ4G0F5 336 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TMTC4Q5T4D3 741 aa8.79□□□□□ -1
CDH13-202ENST00000428848 FAM171BQ6P995 826 aa8.79□□□□□ -1
CDH13-202ENST00000428848 CYP2U1Q7Z449 544 aa8.79□□□□□ -1
CDH13-202ENST00000428848 RASAL3Q86YV0 1011 aa8.79□□□□□ -1
CDH13-202ENST00000428848 ZNF786Q8N393 782 aa8.79□□□□□ -1
CDH13-202ENST00000428848 PNPLA1Q8N8W4 532 aa8.79□□□□□ -1
CDH13-202ENST00000428848 C3orf58Q8NDZ4 430 aa8.79□□□□□ -1
CDH13-202ENST00000428848 GABPB2Q8TAK5 448 aaPredicted RBP8.79□□□□□ -1
CDH13-202ENST00000428848 FATE1Q969F0 183 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TMEM125Q96AQ2 219 aa8.79□□□□□ -1
CDH13-202ENST00000428848 LRRC58Q96CX6 371 aa8.79□□□□□ -1
CDH13-202ENST00000428848 IMP4Q96G21 291 aaKnown RBP8.79□□□□□ -1
CDH13-202ENST00000428848 ZNF641Q96N77 438 aaPredicted RBP8.79□□□□□ -1
CDH13-202ENST00000428848 YTHDF1Q9BYJ9 559 aaKnown RBP8.79□□□□□ -1
CDH13-202ENST00000428848 SIK2Q9H0K1 926 aa8.79□□□□□ -1
CDH13-202ENST00000428848 MUC13Q9H3R2 512 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TUBB1Q9H4B7 451 aa8.79□□□□□ -1
CDH13-202ENST00000428848 NOL6Q9H6R4 1146 aaKnown RBP8.79□□□□□ -1
CDH13-202ENST00000428848 CXorf21Q9HAI6 301 aa8.79□□□□□ -1
CDH13-202ENST00000428848 AURKCQ9UQB9 309 aa8.79□□□□□ -1
CDH13-202ENST00000428848 TIMM13Q9Y5L4 95 aaPredicted RBP8.79□□□□□ -1
CDH13-202ENST00000428848 ANKRD12Q6UB98 2062 aa8.78□□□□□ -1
CDH13-202ENST00000428848 TMX2-CTNND1H3BSU7 103 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms