RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 PTTG2Q9NZH5 202 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 H0Y858 1186 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TEX28O15482 410 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 TGDSO95455 350 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 BMP7P18075 431 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 ARL13AQ5H913 290 aaPredicted RBP14.44□□□□□ -0.1
PTPRU-204ENST00000428026 MRPL45Q9BRJ2 306 aaKnown RBP14.44□□□□□ -0.1
PTPRU-204ENST00000428026 MAT2BQ9NZL9 334 aa14.44□□□□□ -0.1
PTPRU-204ENST00000428026 INHAP05111 366 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 TCF4P15884 667 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 SLC6A2P23975 617 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 SERPINA4P29622 427 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 CAPSQ13938 189 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ERICH5Q6P6B1 374 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 P2RY8Q86VZ1 359 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF781Q8N8C0 355 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 KLHL5Q96PQ7 755 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 RHOJQ9H4E5 214 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 COQ10BQ9H8M1 238 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 NR2E1Q9Y466 385 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 CICQ96RK0 1608 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ERAL1O75616 437 aaKnown RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 NOL4O94818 638 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 CYP2A6P11509 494 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ECT2LQ008S8 904 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 LIPEQ05469 1076 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 PLD1Q13393 1074 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 RAPSNQ13702 412 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 HKDC1Q2TB90 917 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 BICRALQ6AI39 1079 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ADGRD1Q6QNK2 874 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 USP45Q70EL2 814 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 FIBCD1Q8N539 461 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 SIPA1Q96FS4 1042 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ART5Q96L15 291 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 KCNS3Q9BQ31 491 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 PNPLA8Q9NP80 782 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 INTS7Q9NVH2 962 aaKnown RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 RAB23Q9ULC3 237 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 OAS3Q9Y6K5 1087 aaKnown RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 CLDN25C9JDP6 229 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 SPATA31C1P0DKV0 1188 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 POLR2JP52435 117 aaKnown RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ZACNQ401N2 412 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 NT5DC4Q86YG4 428 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 SLC9A9Q8IVB4 645 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF655Q8N720 491 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 OR52J3Q8NH60 311 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 TDRD1Q9BXT4 1180 aaKnown RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 CNOT6Q9ULM6 557 aaKnown RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 CCNE2O96020 404 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF135P52742 658 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 NOMO1Q15155 1222 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ARSHQ5FYA8 562 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 TXNDC11Q6PKC3 985 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 GALNT15Q8N3T1 639 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 OR4L1Q8NH43 312 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 TMEM134Q9H6X4 195 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 ELL3Q9HB65 397 aaPredicted RBP14.43□□□□□ -0.1
PTPRU-204ENST00000428026 CORO2BQ9UQ03 480 aa14.43□□□□□ -0.1
PTPRU-204ENST00000428026 TLL1O43897 1013 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 OLR1P78380 273 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 LSM12Q3MHD2 195 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RAD51AP1Q96B01 352 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 QRFPRQ96P65 431 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 GPATCH1Q9BRR8 931 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 B3GNT5Q9BYG0 378 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 PRDM16Q9HAZ2 1276 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 PFDN2Q9UHV9 154 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 CCNYL3P0C7X3 344 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 ATF4P18848 351 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 PIGWQ7Z7B1 504 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 ADAMTSL2Q86TH1 951 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 UNC93AQ86WB7 457 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 CLIP3Q96DZ5 547 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 GPR20Q99678 358 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RBM4BQ9BQ04 359 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RBM4Q9BWF3 364 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 TNKS2Q9H2K2 1166 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 MRPL17Q9NRX2 175 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 PCDHGA4Q9Y5G9 962 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 B4GALT5O43286 388 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 SNHG28P0DPA3 235 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 WNT3AP56704 352 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RAB25P57735 213 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 SMIM11AP58511 58 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 SGCGQ13326 291 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RNASEH2BQ5TBB1 312 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 CXorf57Q6NSI4 855 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 BHLHB9Q6PI77 547 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 FRMD7Q6ZUT3 714 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 ZNF384Q8TF68 577 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 TP53INP1Q96A56 240 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 RHOBTB2Q9BYZ6 727 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 SPG21Q9NZD8 308 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 UXTQ9UBK9 157 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 STOML2Q9UJZ1 356 aa14.42□□□□□ -0.1
PTPRU-204ENST00000428026 DHX15O43143 795 aaKnown RBP14.42□□□□□ -0.1
PTPRU-204ENST00000428026 SLC28A2O43868 658 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms