RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 UCK1Q9HA47 277 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 TRIM39Q9HCM9 518 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 WASH6PQ9NQA3 447 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 IL17CQ9P0M4 197 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 TTC7AQ9ULT0 858 aaPredicted RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 PADI4Q9UM07 663 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 GPR34Q9UPC5 381 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CLCA2Q9UQC9 943 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 DRG1Q9Y295 367 aaKnown RBP9.08□□□□□ -0.96
SMC1A-203ENST00000428014 COQ6Q9Y2Z9 468 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 ZNF711Q9Y462 761 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 OR1A2Q9Y585 309 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 PCDHGA8Q9Y5G5 932 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 CAPN6Q9Y6Q1 641 aa9.08□□□□□ -0.96
SMC1A-203ENST00000428014 GOLGA6L3A6NEY3 463 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 PRR19A6NJB7 356 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 H7C0C1 242 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 CES2O00748 559 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 NUAK1O60285 661 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 MT-CYBP00156 380 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 NFKB1P19838 968 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 RBL1P28749 1068 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 CCKBRP32239 447 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 HADHAP40939 763 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 ATP5OP48047 213 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 IL9RQ01113 521 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 MSLNQ13421 630 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 HLTFQ14527 1009 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 RPS6KA1Q15418 735 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 TAF1AQ15573 450 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 OASLQ15646 514 aaKnown RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 CCNG2Q16589 344 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 C14orf28Q4W4Y0 310 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 LINC00523Q86TU6 105 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 PHYKPLQ8IUZ5 450 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 HID1Q8IV36 788 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 RBM12BQ8IXT5 1001 aaKnown RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 SLC35F3Q8IY50 421 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 SPC24Q8NBT2 197 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 EID2BQ96D98 161 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 PDXPQ96GD0 296 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 LIN37Q96GY3 246 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 OXNAD1Q96HP4 312 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 SGSM3Q96HU1 749 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 PDLIM2Q96JY6 352 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 OR2M4Q96R27 311 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 HERPUD2Q9BSE4 406 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 TIMM29Q9BSF4 260 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 LGR4Q9BXB1 951 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 FSD1LQ9BXM9 530 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 ZCCHC2Q9C0B9 1178 aaKnown RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 LRRC40Q9H9A6 602 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 GRPEL1Q9HAV7 217 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 SAE1Q9UBE0 346 aaPredicted RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 RSPH14Q9UHP6 348 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 KLK13Q9UKR3 277 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 ACSL6Q9UKU0 697 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 CNOT6Q9ULM6 557 aaKnown RBP9.07□□□□□ -0.96
SMC1A-203ENST00000428014 TFR2Q9UP52 801 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 DOLKQ9UPQ8 538 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 JRKLQ9Y4A0 524 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 TTLL3Q9Y4R7 772 aa9.07□□□□□ -0.96
SMC1A-203ENST00000428014 URB1O60287 2271 aaKnown RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 PKD1L2Q7Z442 2459 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 KIR2DS5A0A0G2JLQ3 304 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 A0A0G2JNG1 304 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 TTC24A2A3L6 582 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 C2orf81A6NN90 581 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 KIR2DS3K7RE56 304 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 NOBOXO60393 691 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SDC3O75056 442 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 DNAJC6O75061 913 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SUN1O94901 812 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 CRTAMO95727 393 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 MT-CO3P00414 261 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 PRKCGP05129 697 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 TNNT1P13805 278 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 JUPP14923 745 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 CTPS1P17812 591 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 LPOP22079 712 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 FDFT1P37268 417 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 LSSP48449 732 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 ERVPABLB-1P60509 514 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 GPLD1P80108 840 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 CDK16Q00536 496 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 DMPKQ09013 629 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 TRA2AQ13595 282 aaKnown RBP eCLIP9.06□□□□□ -0.968e-12■■■■■ 51.5
SMC1A-203ENST00000428014 KIR2DS5Q14953 304 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 GPR33Q49SQ1 333 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 ZNF569Q5MCW4 686 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 LDLRAP1Q5SW96 308 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 HES3Q5TGS1 186 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 DHRS13Q6UX07 377 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 NLRP9Q7RTR0 991 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 LYSMD3Q7Z3D4 306 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 PROSER1Q86XN7 944 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 SLC13A5Q86YT5 568 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-203ENST00000428014 RBFAQ8N0V3 343 aa9.06□□□□□ -0.96
SMC1A-203ENST00000428014 TTC30BQ8N4P2 665 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms