RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 PCDHGA2Q9Y5H1 932 aa10.04□□□□□ -0.8
CD44-207ENST00000425428 HS3ST3A1Q9Y663 406 aa10.04□□□□□ -0.8
CD44-207ENST00000425428 PLXNA2O75051 1894 aa10.04□□□□□ -0.8
CD44-207ENST00000425428 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 DYNC1I1O14576 645 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 GALR2O43603 387 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 KRT38O76015 456 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 MYZAPP0CAP1 466 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 ERVK-10P10266 1014 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 CD27P26842 260 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 TEAD1P28347 426 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 SPRP35270 261 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 HSD17B3P37058 310 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 RABIFP47224 123 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 DHPSP49366 369 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 SERPINB9P50453 376 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 YPEL5P62699 121 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 GPS2Q13227 327 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 PTPRRQ15256 657 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 CHRNA6Q15825 494 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 PNCKQ6P2M8 343 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 DCP2Q8IU60 420 aaKnown RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 IGDCC3Q8IVU1 814 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 RBFAQ8N0V3 343 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 PPM1NQ8N819 430 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 GPR150Q8NGU9 434 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 VOPP1Q96AW1 172 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 HIC2Q96JB3 615 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 HSPA12BQ96MM6 686 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 ZNF778Q96MU6 729 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 FCRL3Q96P31 734 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 VPS35Q96QK1 796 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 CPNE1Q99829 537 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 CLPBQ9H078 707 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 MIR1-1HGQ9H1L0 117 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 DUSP15Q9H1R2 295 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 C6orf106Q9H6K1 298 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 ACSS3Q9H6R3 686 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 SUDS3Q9H7L9 328 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 TRIOO75962 3097 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 DOCK9Q9BZ29 2069 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 ZCWPW2A0A1B0GU75 182 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 A0A1W2PPC4 97 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 UBA6A0AVT1 1052 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 A6NNZ2 444 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 POC1B-GALNT4F8VUJ3 575 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 H3BMM5 538 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 KRT37O76014 449 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 PSMA3P25788 255 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 ATP5DP30049 168 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 NSG1P42857 185 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 PTGER3P43115 390 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 OVGP1Q12889 678 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 SIM2Q14190 667 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 ITIH4Q14624 930 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 PTPRCAPQ14761 206 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 IRF4Q15306 451 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 HENMT1Q5T8I9 393 aaKnown RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 GRTP1Q5TC63 336 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 ADAMTSL4Q6UY14 1074 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 PRR23BQ6ZRT6 265 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 FAM160A2Q8N612 972 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 BTN2A2Q8WVV5 523 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 SCAMP4Q969E2 229 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 GLYATL1Q969I3 302 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 BIRC7Q96CA5 298 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 ZNF514Q96K75 400 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 ROPN1BQ9BZX4 212 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 STMN4Q9H169 189 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 ROPN1Q9HAT0 212 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 SMOXQ9NWM0 555 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 ZDHHC3Q9NYG2 299 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 MOCS1Q9NZB8 636 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 FBXO5Q9UKT4 447 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 CORO1CQ9ULV4 474 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 ZFR2Q9UPR6 939 aaKnown RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.03□□□□□ -0.8
CD44-207ENST00000425428 PCDHB1Q9Y5F3 818 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 COMMD10Q9Y6G5 202 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 EML5Q05BV3 1969 aa10.03□□□□□ -0.8
CD44-207ENST00000425428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 A0A0U1RQS6 177 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 IQANK1A0A1B0GTG1 560 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 GPR89AB7ZAQ6 455 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 GOLGA8KD6RF30 607 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 E5RI56 91 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 GOLGA8TH3BQL2 631 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 CCL22O00626 93 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 SPINT1O43278 529 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 LATO43561 262 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 VEGFDO43915 354 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 OR56A5P0C7T3 313 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 GPR89BP0CG08 455 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 SP9P0CG40 484 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 ACRV1P26436 265 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 CNTFP26441 200 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 GP5P40197 560 aa10.02□□□□□ -0.81
CD44-207ENST00000425428 CD151P48509 253 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms