RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 LACRTQ9GZZ8 138 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 PHPT1Q9NRX4 125 aaPredicted RBP12.91□□□□□ -0.34
VRK3-203ENST00000424804 MOSPD1Q9UJG1 213 aa12.91□□□□□ -0.34
VRK3-203ENST00000424804 CNOT6Q9ULM6 557 aaKnown RBP12.91□□□□□ -0.34
VRK3-203ENST00000424804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
VRK3-203ENST00000424804 SPTA1P02549 2419 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 C3orf70A6NLC5 250 aaPredicted RBP12.9□□□□□ -0.34
VRK3-203ENST00000424804 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.9□□□□□ -0.34
VRK3-203ENST00000424804 KCNK1O00180 336 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 PDE2AO00408 941 aaPredicted RBP12.9□□□□□ -0.34
VRK3-203ENST00000424804 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
VRK3-203ENST00000424804 CPNE6O95741 557 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 EML2O95834 649 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 JCHAINP01591 159 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 JMJD7P0C870 316 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 FGF3P11487 239 aaPredicted RBP12.9□□□□□ -0.34
VRK3-203ENST00000424804 ZFXP17010 805 aaPredicted RBP12.9□□□□□ -0.34
VRK3-203ENST00000424804 CCNCP24863 283 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 GNPDA1P46926 289 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 DSC2Q02487 901 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 KIF5AQ12840 1032 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 ARHGEF7Q14155 803 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 CCDC181Q5TID7 509 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 SLC9A4Q6AI14 798 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 ADAMTSL4Q6UY14 1074 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 VASH2Q86V25 355 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 LRRC49Q8IUZ0 686 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 TMEM139Q8IV31 216 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 ARRDC2Q8TBH0 407 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 SCAMP4Q969E2 229 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 SGF29Q96ES7 293 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 COX14Q96I36 57 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 GSDMCQ9BYG8 508 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 HAUS2Q9NVX0 235 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 KCTD5Q9NXV2 234 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
VRK3-203ENST00000424804 TMEM9Q9P0T7 183 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 CD84Q9UIB8 345 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 TMEM98Q9Y2Y6 226 aa12.9□□□□□ -0.34
VRK3-203ENST00000424804 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 A0A0U1RQJ8 604 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
VRK3-203ENST00000424804 CST8O60676 142 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 HLA-DQB2P05538 268 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 CYP2A6P11509 494 aaPredicted RBP12.89□□□□□ -0.35
VRK3-203ENST00000424804 CSF2RBP32927 897 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 LIMK2P53671 638 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 MAPK10P53779 464 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 EPHB1P54762 984 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 GSDMDP57764 484 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 NIPAL4Q0D2K0 466 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 TFDP2Q14188 446 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 AMZ1Q400G9 498 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 PYCR3Q53H96 274 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 ARMC12Q5T9G4 340 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 NKAIN2Q5VXU1 208 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 SLC30A9Q6PML9 568 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 PIM3Q86V86 326 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 TXLNBQ8N3L3 684 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 RCBTB1Q8NDN9 531 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 KIAA1524Q8TCG1 905 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 KRT35Q92764 455 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 EXTL1Q92935 676 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 HDAC11Q96DB2 347 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
VRK3-203ENST00000424804 CMKLR1Q99788 373 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 HEMGNQ9BXL5 484 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 SPRY4Q9C004 299 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 SUDS3Q9H7L9 328 aaPredicted RBP12.89□□□□□ -0.35
VRK3-203ENST00000424804 PDP2Q9P2J9 529 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 SAE1Q9UBE0 346 aaPredicted RBP12.89□□□□□ -0.35
VRK3-203ENST00000424804 PCDHGA4Q9Y5G9 962 aa12.89□□□□□ -0.35
VRK3-203ENST00000424804 A0A0J9YYE9 177 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 DNAJC6O75061 913 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 TRBC1P01850 177 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 PTMAP06454 111 aaKnown RBP12.88□□□□□ -0.35
VRK3-203ENST00000424804 ALDH4A1P30038 563 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 CDKN2BP42772 138 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 GPR3P46089 330 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 STC1P52823 247 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 CYP4F2P78329 520 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 ILF3Q12906 894 aaKnown RBP eCLIP12.88□□□□□ -0.35
VRK3-203ENST00000424804 ZBTB17Q13105 803 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 PDK1Q15118 436 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 TBR1Q16650 682 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 CLPPQ16740 277 aaPredicted RBP12.88□□□□□ -0.35
VRK3-203ENST00000424804 TFDP3Q5H9I0 405 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.88□□□□□ -0.35
VRK3-203ENST00000424804 PHF19Q5T6S3 580 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 LRRC66Q68CR7 880 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 RAET1GQ6H3X3 334 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 ZNF765Q7L2R6 523 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 TRIM74Q86UV6 250 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 ZC3H18Q86VM9 953 aaKnown RBP12.88□□□□□ -0.35
VRK3-203ENST00000424804 KATNAL2Q8IYT4 538 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 RCOR2Q8IZ40 523 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 FATE1Q969F0 183 aa12.88□□□□□ -0.35
VRK3-203ENST00000424804 CCDC74BQ96LY2 380 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms