RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 DNAJB12Q9NXW2 375 aaKnown RBP3.54□□□□□ -1.84
TOP2A-201ENST00000423485 MYO1AQ9UBC5 1043 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 PYCARDQ9ULZ3 195 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 SIP14410 1827 aa3.54□□□□□ -1.84
TOP2A-201ENST00000423485 C2orf92A0A1B0GVN3 265 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 BCLAF3A2AJT9 711 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 GTPBP10A4D1E9 387 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 FAM149AA5PLN7 773 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 KCNU1A8MYU2 1149 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 LRRN2O75325 713 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CLDN11O75508 207 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 STAU1O95793 577 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 NCF2P19878 526 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TAC1P20366 129 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CYP3A5P20815 502 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 GPC1P35052 558 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TKTL1P51854 596 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 GCNT1Q02742 428 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CNTN1Q12860 1018 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TRA2AQ13595 282 aaKnown RBP eCLIP3.53□□□□□ -1.843e-9■■■■□ 20
TOP2A-201ENST00000423485 DDX39BQ13838 428 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SF1Q15637 639 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 DDR2Q16832 855 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ATXN7L2Q5T6C5 722 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 B4GALNT4Q76KP1 1039 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SLC22A16Q86VW1 577 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SDR16C5Q8N3Y7 309 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 BRSK1Q8TDC3 778 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 PIGTQ969N2 578 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 HIST1H2AAQ96QV6 131 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ROGDIQ9GZN7 287 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 FKRPQ9H9S5 495 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ADGRG1Q9Y653 693 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 AP1M2Q9Y6Q5 423 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 KIF26AQ9ULI4 1882 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 A0A1W2PPH5 198 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 A0A1W2PRG0 241 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 C3orf70A6NLC5 250 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 NUDT19A8MXV4 375 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 HAT1O14929 419 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 NRP2O60462 931 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SRPRAP08240 638 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 POU2F2P09086 479 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CEBPBP17676 345 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TKTP29401 623 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TRIM23P36406 574 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 BRCC3P46736 316 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 GRIA4P48058 902 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 MAN2A2P49641 1150 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 RPL26P61254 145 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 YWHAGP61981 247 aaKnown RBP eCLIP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 PSMC1P62191 440 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 RBL2Q08999 1139 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 RAB33AQ14088 237 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 DEFB121Q5J5C9 76 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TMEM201Q5SNT2 666 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 FAM69BQ5VUD6 431 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 PLA2G4FQ68DD2 849 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 FIP1L1Q6UN15 594 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 GK5Q6ZS86 529 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CDR2LQ86X02 465 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 OVCA2Q8WZ82 227 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 EMID1Q96A84 441 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 MTMR12Q9C0I1 747 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 GLOD4Q9HC38 313 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 XAB2Q9HCS7 855 aaKnown RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ADPRHL2Q9NX46 363 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 EURLQ9NYK6 297 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 DERAQ9Y315 318 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 DTNAQ9Y4J8 743 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 PCDHGB7Q9Y5F8 929 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 PCDHGA1Q9Y5H4 931 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CLCA3PQ9Y6N3 262 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 TET1Q8NFU7 2136 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 A0A0A6YYC8 382 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 A0A0D9SFI3 127 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 GSG1L2A8MUP6 293 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 E7ENQ6 273 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 I3L1I5 382 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 BUB1BO60566 1050 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CYP7B1O75881 506 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SASH3O75995 380 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SLC25A14O95258 325 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 AGTP01019 485 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 HIST1H2ABP04908 130 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 EPHA8P29322 1005 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SLC7A1P30825 629 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 HOXA9P31269 272 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CTHP32929 405 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 IDUAP35475 653 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 SUOXP51687 545 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ERVPABLB-1P60509 514 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ROR1Q01973 937 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ADAM9Q13443 819 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 ITGA9Q13797 1035 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 DHCR24Q15392 516 aa3.53□□□□□ -1.84
TOP2A-201ENST00000423485 FAM102AQ5T9C2 384 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 B3GNTL1Q67FW5 361 aaPredicted RBP3.53□□□□□ -1.84
TOP2A-201ENST00000423485 CLEC9AQ6UXN8 241 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms