RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 DDX25Q9UHL0 483 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 ERRFI1Q9UJM3 462 aaPredicted RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZNF510Q9Y2H8 683 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CLDN16Q9Y5I7 305 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 A2MP01023 1474 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZNF518AQ6AHZ1 1483 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 AK9Q5TCS8 1911 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 CROCC2H7BZ55 1655 aa3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 KDM5AP29375 1690 aaKnown RBP3.46□□□□□ -1.86
SDCBPP3-201ENST00000419629 GPR75-ASB3A0A0A6YYF3 556 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCDC162PA2VCL2 907 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM221A6NGB7 291 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 HSPB6O14558 160 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ASAP2O43150 1006 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 LIASO43766 372 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 USO1O60763 962 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 PFDN1O60925 122 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 TPPPO94811 219 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ANP32DO95626 131 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 SERPINC1P01008 464 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CHRM4P08173 479 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ACAA1P09110 424 aaPredicted RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 LINGO3P0C6S8 592 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 RHOXF2BP0C7M4 288 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 HOXA11P31270 313 aaPredicted RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 SELENOVP59797 346 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 HILS1P60008 231 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ELF3P78545 371 aaPredicted RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 KIF5AQ12840 1032 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CBX3Q13185 183 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 INAQ16352 499 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 PTGISQ16647 500 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 DUSP6Q16828 381 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 EDRF1Q3B7T1 1238 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 DCAF6Q58WW2 860 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 MAP3K21Q5TCX8 1036 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 GKAP1Q5VSY0 366 aaPredicted RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ARMC3Q5W041 872 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 EMBQ6PCB8 327 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 C16orf87Q6PH81 154 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 C6orf89Q6UWU4 347 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 IL20RBQ6UXL0 311 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CTU1Q7Z7A3 348 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 PATL1Q86TB9 770 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 NLRP14Q86W24 1093 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 FAM228AQ86W67 206 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 DZIP1Q86YF9 867 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 VSTM4Q8IW00 320 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCDC63Q8NA47 563 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZMIZ2Q8NF64 920 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ENGASEQ8NFI3 743 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 RFWD2Q8NHY2 731 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CEP76Q8TAP6 659 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 WFIKKN2Q8TEU8 576 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CNOT9Q92600 299 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 STAMQ92783 540 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 CCDC51Q96ER9 411 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 STAMBPL1Q96FJ0 436 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 IFT74Q96LB3 600 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 PANX2Q96RD6 677 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 RHOXF2Q9BQY4 288 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 REEP2Q9BRK0 252 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 NUP58Q9BVL2 599 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 TM6SF1Q9BZW5 370 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 TAOK3Q9H2K8 898 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 STN1Q9H668 368 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 TMEM165Q9HC07 324 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 EXOC1Q9NV70 894 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 HAUS2Q9NVX0 235 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 AATFQ9NY61 560 aaKnown RBP eCLIP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 LARSQ9P2J5 1176 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 HDAC6Q9UBN7 1215 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 PLEKHB1Q9UF11 243 aaPredicted RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 BAIAP2L1Q9UHR4 511 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 GPR52Q9Y2T5 361 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ASB3Q9Y575 518 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 PCDHGB1Q9Y5G3 927 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 INSL5Q9Y5Q6 135 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 BZW2Q9Y6E2 419 aaKnown RBP3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 KIAA0232Q92628 1395 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 ARHGEF5Q12774 1597 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 IQGAP1P46940 1657 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 MYOM1P52179 1685 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 SHPRHQ149N8 1683 aa3.45□□□□□ -1.86
SDCBPP3-201ENST00000419629 NPATQ14207 1427 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 DUOX2Q9NRD8 1548 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 USP32Q8NFA0 1604 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 MYO5CQ9NQX4 1742 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 IFT140Q96RY7 1462 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 SBNO1A3KN83 1393 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 C5orf60A6NFR6 353 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 DDTLA6NHG4 134 aaPredicted RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 SH2D7A6NKC9 451 aaPredicted RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 FAM157AC9JC47 383 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 EIF3FO00303 357 aaPredicted RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 WDR46O15213 610 aaKnown RBP3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 ZNF432O94892 652 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 MBD4O95243 580 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 BAG3O95817 575 aa3.44□□□□□ -1.86
SDCBPP3-201ENST00000419629 HOXC6P09630 235 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms